Gene Information

Name : capM (SAR0163)
Accession : YP_039628.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG2148
EC number : -
Position : 181426 - 181983 bp
Length : 558 bp
Strand : +
Note : Similar to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap5M TR:P95706 (EMBL:U81973) (185 aa) fasta scores: E(): 4.5e-69, 99.459% id in 185 aa, and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8M TR:P72379 (EMBL:

DNA sequence : 
ATGAAGCGATTATTCGATGTAGTGAGTTCAATATATGGTTTAGTAGTTTTAAGTCCGATTCTGTTAATTACAGCATTACT
AATTAAAATGGAATCACCCGGACCAGCCATTTTCAAACAAAAAAGACCGACGATTAATAATGAATTGTTTAATATTTATA
AGTTTAGATCAATGAAAATAGACACACCTAATGTTGCAACTGATTTAATGGATTCAACAGCGTATATAACAAAGACAGGG
AAGGTCATTCGTAAAACCTCTATTGATGAATTGCCACAATTATTGAATGTTTTAAAAGGAGAAATGTCAATTGTAGGTCC
TAGACCAGCGCTTTATAATCAATACGAATTAATTGAAAAACGTACAAAAGCGAACGTGCATACGATTAGACCAGGTGTAA
CAGGGCTAGCTCAAGTGATGGGGAGAGATGATATTACTGATGATCAAAAAGTAGCGTATGATCATTATTACTTAACACAT
CAATCTATGATGCTTGATATGTATATCATATATAAAACAATTAAAAATATCGTTACTTCAGAAGGTGTGCATCACTAA

Protein sequence : 
MKRLFDVVSSIYGLVVLSPILLITALLIKMESPGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTAYITKTG
KVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
QSMMLDMYIIYKTIKNIVTSEGVHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 3e-63 69
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 9e-63 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capM YP_039628.1 capsular polysaccharide synthesis enzyme VFG1309 Protein 3e-85 99
capM YP_039628.1 capsular polysaccharide synthesis enzyme VFG1369 Protein 3e-32 49
capM YP_039628.1 capsular polysaccharide synthesis enzyme VFG0032 Protein 2e-14 41