Gene Information

Name : capC (SAR0153)
Accession : YP_039618.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG4464
EC number : -
Position : 170031 - 170795 bp
Length : 765 bp
Strand : +
Note : Highly imilar to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8C TR:P72369 (EMBL:U73374) (254 aa) fasta scores: E(): 1.5e-96, 99.213% id in 254 aa, and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap5C TR:P95697

DNA sequence : 
ATGATTGATATTCATAACCATATATTGCCGAATATCGATGACGGTCCGACAAATGAAACAGAGATGCTGGATCTTTTAAG
ACAAGCGACAACACAAGGTGTTACAGAAGTCATTGTAACATCACATCACTTACATCCTCGATATACCACACCTATAGAAA
AAGTGAAATCATGTTTAAACCATATTGAAAGCTTAGAGGAAGTACAAGCACTAAATCTAAAGTTTTATTATGGTCAGGAA
ATAAGAATTACCGATCAAATCCTTAATGATATTGATCGAAAAGTTATTACCGGTATTAATGATTCACGCTATTTACTAAT
AGAATTTCCATCAAATGAAGTTCCACACTATACTGATCAATTATTTTTCGAATTACAGAGTAAAGGCTTTGTACCGATTA
TTGCACATCCAGAGCGGAATAAAGCAATAAGTCAAAACCTTGACATACTATACGATTTAATTAACAAAGGTGCTTTAAGT
CAAGTGACAACGGCGTCATTAGCGGGTATTTCCGGTAAAAAAATTAGAAAATTAGCAATTCAAATGATTGAAAACAATCT
GACACATTTCATCGGTTCAGATGCGCATAACACAGAAATCAGACCGTTCTTAATGAAAGACTTATTTAATGATAAGAAAT
TACGTGATTATTATGAAGATATGAACGGATTTATTAGTAATGCGAAGTTAGTTGTTGATGATAAAAAAATTCCTAAACGA
ATGCCACAACAAGATTATAAACAGAAAAGATGGTTTGGGTTATAA

Protein sequence : 
MIDIHNHILPNIDDGPTNETEMLDLLRQATTQGVTEVIVTSHHLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQE
IRITDQILNDIDRKVITGINDSRYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALS
QVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR
MPQQDYKQKRWFGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-81 60
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 2e-63 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capC YP_039618.1 capsular polysaccharide synthesis enzyme VFG1299 Protein 6e-119 99