Gene Information

Name : capB (SAR0152)
Accession : YP_039617.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 169342 - 170028 bp
Length : 687 bp
Strand : +
Note : Highly imilar to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap8B TR:P72368 (EMBL:U73374) (228 aa) fasta scores: E(): 3.8e-77, 96.491% id in 228 aa, and to Staphylococcus aureus capsular polysaccharide synthesis enzyme Cap5B TR:P95696

DNA sequence : 
ATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTGTATGAAAAACCAAAATCAACAATTAGTGAAAAGTTTCGAGG
TATACGTTCAAACATCATGTTTTCAAAAGCAAATGGTGAAGTAAAGCGCTTATTGGTTACTTCTGAAAAGCCTGGTGCAG
GTAAAAGTACAGTCGTATCCAATGTAGCGATTACTTATGCACAAGCAGGTTATAAATCGTTAATTATCGATGGGGATATG
CGTAAGCCAACACAAAACTATATTTTTAATGAACAAAATAATAATGGATTATCGAATTTAATCATTGGTAGAACGACTAT
GTCAGAAGCTATTACGACGACAGAAATTGATAATTTAGATTTACTAACAGCTGGTCCTGTACCTCCTAATCCAACAGAAT
TAATTGGTTCTGAAAGATTTAAAGAGTTAGTTAATCTTTTCAATGAGCGTTATGACATCATTATTGTCGATACACCGCCA
GTTAATACCGTGACTGATGCACAACTATATGCACGTGCTATTAAAGATAGTCTGTTAGTCATTGATAGTGAAAAAAATGA
TAAAAATGAAGTTAAAAAAGCTAAAACACTTATGGAAAAAGCAGGCAGTAATATTCTAGGCGTCATTTTAAATAAGGCAA
AAGTAGATAAGTCTTCTAGTTATTATCACTATTATGGAGATGAATAG

Protein sequence : 
MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKSLIIDGDM
RKPTQNYIFNEQNNNGLSNLIIGRTTMSEAITTTEIDNLDLLTAGPVPPNPTELIGSERFKELVNLFNERYDIIIVDTPP
VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKTLMEKAGSNILGVILNKAKVDKSSSYYHYYGDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 4e-73 64
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 4e-62 58

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_039617.1 capsular polysaccharide synthesis enzyme VFG1298 Protein 1e-100 96