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Name : xerD (SAR1573) Accession : YP_040971.1 Strain : Staphylococcus aureus MRSA252 Genome accession: NC_002952 Putative virulence/resistance : Unknown Product : integrase/recombinase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG4974 EC number : - Position : 1645929 - 1646816 bp Length : 888 bp Strand : - Note : Similar to Escherichia coli integrase/recombinase XerD SW:XERD_ECOLI (P21891) (298 aa) fasta scores: E(): 4.3e-44, 44.178% id in 292 aa. Previously sequenced as Staphylococcus aureus site-specific recombinase XerD TR:Q9KJF7 (EMBL:AF173869) (295 aa) fasta DNA sequence : ATGGAAACAATTATTGAAGAATATTTGCGTTTTATACAAATTGAAAAAGGACTAAGTTCTAACACAATTGGTGCTTATAG ACGTGATTTGAAAAAGTATCAAGATTATATGACTGAACATCATATCTCGCATATTGATTTTATAGATCGACAATTAATTC AAGAGTGTTTGGGGCATTTAATAGACCAAGGGCAATCTGCTAAATCCATTGCGCGATTTATTTCAACAATCCGTAGTTTT CATCAATTTGCTATAAGAGAAAAATATGCGGCGAAAGATCCAACGGTATTATTAGATTCACCAAAATATGACAAAAAATT GCCTGACGTTTTAAATGTTGACGAAGTGTTGGCTTTATTAGAAACGCCGGATTTAAATAAAATTAATGGTTATCGTGATC GTACGATGTTAGAACTTCTGTACGCAACGGGAATGCGTGTATCTGAATTGATACATTTAGAGCTAGAGAACGTGAACTTA ATAATGGGGTTTGTACGCGTATTTGGTAAAGGCGATAAAGAAAGAATTGTGCCATTAGGCGACGCAGTCATTGAGTACTT AACTACTTATATTGAAACGATTAGACCGCAACTTTTAAAAAAGACTGTTACTGAAGTCTTATTTTTAAATATGCATGGTA AACCTTTATCACGACAAGCAATATGGAAAATGATTAAACAAAATGGTGTAAAGGCAAACATTAAAAAGACGCTAACGCCA CATACGTTGCGCCATTCTTTTGCGACACATTTATTGGAAAATGGCGCAGATTTAAGAGCAGTGCAAGAGATGTTAGGTCA CTCTGACATATCTACTACCCAACTCTATACACATGTTTCAAAATCTCAAATTAGAAAAATGTATAACCAATTTCATCCTA GAGCATAA Protein sequence : METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISHIDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSF HQFAIREKYAAKDPTVLLDSPKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL IMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMIKQNGVKANIKKTLTP HTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYNQFHPRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00307 | YP_008207772.1 | Site-specific recombinase XerD | Not tested | AbaR25 | Protein | 4e-52 | 43 |
| BJAB0868_00311 | YP_008211637.1 | Site-specific recombinase XerD | Not tested | AbaR26 | Protein | 4e-52 | 43 |
