Gene Information

Name : SAR1498 (SAR1498)
Accession : YP_040899.1
Strain : Staphylococcus aureus MRSA252
Genome accession: NC_002952
Putative virulence/resistance : Virulence
Product : holin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1593824 - 1594126 bp
Length : 303 bp
Strand : -
Note : Highly similar to bacteriophage phi PVL holin TR:O80063 (EMBL:AB009866) (100 aa) fasta scores: E(): 1.7e-36, 99.000% id in 100 aa, and to Staphylococcus aureus temperate phage phiSLT holin TR:Q9B0C4 (EMBL:AB045978) (100 aa) fasta scores: E(): 4.3e-36, 97.

DNA sequence :
ATGGATGCAAAAGTAATAACAAGATACATCGTATTGATCTTAGCATTAGTAAATCAATTCTTAGCGAACAAAGGTATTAG
CCCGATTCCAGTAGACGATGAGACTATATCATCAATAATACTTACTGTTGTTGCTTTATATACTACGTATAAAGACAATC
CAACATCTCAAGAAGGGAAATGGGCGAATCAAAAATTAAAGAAATATAAAGCTGAAAGTAAATATAGAAAAGCAACAGGA
CAAGCACCTATTAAAGAAGTAATGACACCTACGAATATGAACGACACAAATGATTTAGGGTAG

Protein sequence :
MDAKVITRYIVLILALVNQFLANKGISPIPVDDETISSIILTVVALYTTYKDNPTSQEGKWANQKLKKYKAESKYRKATG
QAPIKEVMTPTNMNDTNDLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
MW1381 NP_646198.1 holin Virulence ¥ÕSa2 Protein 9e-41 99
SAUSA300_1384 YP_494081.1 phiSLT ORF100b-like protein, holin Not tested ¥ÕSa2 Protein 1e-40 97
SAOV_0341 YP_005735858.1 phage holin Not tested ¥ÕSa1 Protein 4e-40 92