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Name : SAR1375 (SAR1375) Accession : YP_040780.1 Strain : Staphylococcus aureus MRSA252 Genome accession: NC_002952 Putative virulence/resistance : Unknown Product : transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 1431432 - 1433078 bp Length : 1647 bp Strand : - Note : Similar to Staphylococcus aureus prophage phiPV83 transposase TR:Q9MBP7 (EMBL:AB044554) (548 aa) fasta scores: E(): 9.8e-199, 99.453% id in 548 aa, and to Bacillus halodurans cassette chromosome recombinase B1 BH0682 TR:Q9KF15 (EMBL:AP001509) (522 aa) fas DNA sequence : ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATATTTCACG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATTATCTTATATGCATACACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT CATGACAGTATTCGAATGATGTGGTTAGCTCAAAATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTAAATCC TAATACTGATGCATTAATTGAATCTTTATTTATTCAGTTTCATAGTCAATGTTTAAAGCAAAATCTTATTGATGATAATT CAATTTTTATTGATGGTACAAAAGTAGAAGCTAATGCCAATAGGTATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC GAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGA TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT CTATTCAGAACGAAGATTGTACTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAA TTTGATGATTATTCCGAAAGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAAC TGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAA TAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA ACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATAT GGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGTATGTTTATTAAAGATAAAACGAGAAAGTTTAAAA GTGACATTTTTAACACTCAAAACTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGT TTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAACTATATGAATGCGATGACTGTTCAGC ATGTTCTTTGAGGCAACAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACT TTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCT GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGG TTTTGTATTAATGGCACTTAATATAAGGAAAATAGTAGCTCGACGAGCTGTATATTATCAAATACATTTAAAAAAAGCTG ATTTCTATCAAATAATTAATAGAAATCAGCTTTTTTACATTGCCTAA Protein sequence : MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL HDSIRMMWLAQNQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDDNSIFIDGTKVEANANRYTFVWKKSIQNH ESKLNENSKALYRDLVEEKIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIQNEDCTQIRKQTRKKRTEIKKFKKK FDDYSERKSKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYDLFQNPTDTRTLIPFL TMIQNTFGYLPEYIVADAGYGSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIG FKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVEP VFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRKIVARRAVYYQIHLKKADFYQIINRNQLFYIA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 2e-172 | 83 |
| unnamed | BAC67565.1 | hypothetical protein | Not tested | Type-IVc SCCmec | Protein | 2e-148 | 82 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 0.0 | 82 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 0.0 | 82 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 0.0 | 82 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 82 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 0.0 | 82 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 0.0 | 81 |
