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Name : pdhD (SAR1070) Accession : YP_040483.1 Strain : Staphylococcus aureus MRSA252 Genome accession: NC_002952 Putative virulence/resistance : Unknown Product : dihydrolipoamide dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1249 EC number : 1.8.1.4 Position : 1116390 - 1117796 bp Length : 1407 bp Strand : + Note : E3 component of pyruvate complex; catalyzes the oxidation of dihydrolipoamide to lipoamide DNA sequence : ATGGTAGTTGGAGATTTCCCAATTGAAACAGATACTATAGTAATCGGAGCAGGTCCTGGTGGATACGTTGCAGCAATTCG TGCAGCTCAATTAGGACAAAAAGTAACAATCGTTGAGAAAGGTAATCTTGGTGGTGTTTGCTTAAACGTAGGATGTATTC CTTCAAAAGCATTACTACATGCTTCTCACCGTTTTGTTGAAGCACAACATTCTGAAAACTTAGGTGTTATTGCTGAAAGT GTTTCTTTAAACTTCCAAAAAGTTCAAGAATTCAAATCATCAGTTGTTAATAAATTAACTGGTGGTGTTGAAGGCTTACT TAAAGGTAACAAAGTAAACATCGTTAAAGGTGAAGCATATTTCGTAGATAACAATAGCTTACGTGTTATGGACGAAAAGA GCGCACAAACATACAACTTTAAAAACGCAATCATTGCAACAGGTTCAAGACCAATTGAAATTCCTAATTTCAAATTCGGT AAACGTGTTATCGACTCAACAGGTGCTTTAAATTTACAAGAAGTACCAGGTAAATTAGTTGTAGTTGGTGGAGGATACAT TGGATCAGAATTAGGTACAGCATTTGCTAACTTTGGTTCAGAAGTAACCATCCTTGAAGGTGCTAAAGATATCTTAGGTG GCTTCGAAAAACAAATGACACAACCTGTTAAAAAAGGTATGAAAGAAAAAGGTGTTGAAATCGTTACTGAAGCAATGGCT AAATCAGCTGAAGAAACAGATAACGGAGTTAAAGTTACTTATGAAGCTAAAGGCGAAGAGAAAACAATCGAAGCTGATTA TGTATTAGTAACTGTAGGTCGTCGTCCAAACACAGACGAATTAGGCCTAGAAGAATTAGGTGTTAAATTCGCTGACCGTG GATTATTAGAAGTTGATAAACAAAGCCGTACGTCTATCAGCAATATCTATGCAATTGGTGATATCGTTCCAGGTTTACCA CTTGCTCACAAAGCTAGCTATGAAGCTAAAGTTGCTGCTGAAGCAATTGATGGTCAAGCTGCTGAAGTTGATTACATTGG TATGCCAGCAGTATGCTTTACTGAACCTGAATTAGCTACAGTTGGTTATTCAGAAGCGCAAGCTAAAGAAGAAGGTTTAG CAATTAAAGCTTCTAAATTTCCATATGCAGCAAATGGTCGTGCATTATCATTAGACGATACTAACGGATTTGTTAAACTT ATTACACTTAAAGAAGATGATACTTTAATCGGTGCTCAAGTAGTTGGTACTGGTGCATCAGATATTATCTCTGAATTAGG TTTAGCAATTGAAGCTGGTATGAATGCTGAAGATATCGCATTAACAATCCATGCACATCCAACATTAGGTGAGATGACTA TGGAAGCAGCTGAAAAAGCTATCGGATACCCAATCCATACAATGTAA Protein sequence : MVVGDFPIETDTIVIGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKALLHASHRFVEAQHSENLGVIAES VSLNFQKVQEFKSSVVNKLTGGVEGLLKGNKVNIVKGEAYFVDNNSLRVMDEKSAQTYNFKNAIIATGSRPIEIPNFKFG KRVIDSTGALNLQEVPGKLVVVGGGYIGSELGTAFANFGSEVTILEGAKDILGGFEKQMTQPVKKGMKEKGVEIVTEAMA KSAEETDNGVKVTYEAKGEEKTIEADYVLVTVGRRPNTDELGLEELGVKFADRGLLEVDKQSRTSISNIYAIGDIVPGLP LAHKASYEAKVAAEAIDGQAAEVDYIGMPAVCFTEPELATVGYSEAQAKEEGLAIKASKFPYAANGRALSLDDTNGFVKL ITLKEDDTLIGAQVVGTGASDIISELGLAIEAGMNAEDIALTIHAHPTLGEMTMEAAEKAIGYPIHTM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0077 | NP_763632.1 | dihydrolipoamide dehydrogenase component of pyruvate dehydrogenase E3 | Not tested | SCCpbp4 | Protein | 6e-109 | 50 |
