Gene Information

Name : sek (SACOL0886)
Accession : YP_185757.1
Strain : Staphylococcus aureus COL
Genome accession: NC_002951
Putative virulence/resistance : Virulence
Product : enterotoxin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 904800 - 905528 bp
Length : 729 bp
Strand : -
Note : identified by match to protein family HMM PF01123; match to protein family HMM PF02876

DNA sequence :
ATGAAAAAATTAATAAGCATCTTATTAATAAATATAATAATTTTAGGTGTCTCTAATAGTGCCAGCGCTCAAGGTGATAT
AGGAATTGATAATCTCAGGAATTTTTATACAAAAAAAGACTTCGTAGATTTAAAAGATGTAAAAGACAATGATACTCCTA
TAGCTAATCAACTACAATTTTCAAATGAATCTTATGATTTAATTTCAGAATCAAAAGATTTTAATAAATTTAGTAATTTC
AAGGGAAAAAAACTTGATGTTTTTGGTATTAGTTATAATGGCCAGTGTAACACTAAATACATATATGGCGGAGTCACAGC
TACTAACGAATATCTAGATAAATCTAGAAATATACCTATAAATATATGGATTAATGGAAATCACAAAACTATTTCTACCA
ATAAAGTTTCGACAAATAAAAAATTTGTTACCGCTCAAGAGATTGATGTCAAATTAAGAAAGTACCTTCAAGAAGAATAC
AACATTTATGGACATAACGGCACTAAAAAAGGAGAAGAATATGGTCATAAATCAAAATTTTATTCTGGATTTAATATTGG
TAAAGTAACGTTCCATTTAAATAATAATGACACTTTTTCATATGATTTATTCTACACAGGAGATGATGGGTTACCAAAAA
GTTTTTTAAAAATTTACGAAGACAATAAAACTGTAGAGTCTGAGAAATTCCATTTGGATGTCGATATTTCTTATAAAGAA
ACGATATAA

Protein sequence :
MKKLISILLINIIILGVSNSASAQGDIGIDNLRNFYTKKDFVDLKDVKDNDTPIANQLQFSNESYDLISESKDFNKFSNF
KGKKLDVFGISYNGQCNTKYIYGGVTATNEYLDKSRNIPINIWINGNHKTISTNKVSTNKKFVTAQEIDVKLRKYLQEEY
NIYGHNGTKKGEEYGHKSKFYSGFNIGKVTFHLNNNDTFSYDLFYTGDDGLPKSFLKIYEDNKTVESEKFHLDVDISYKE
TI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sek AAL04147.1 Sek Virulence SaPI3 Protein 8e-91 100
sek YP_185757.1 enterotoxin Virulence vSa1 Protein 1e-90 100
entK AAC28968.1 staphylococcal enterotoxin K Virulence SaPI1 Protein 4e-90 99
sek YP_493500.1 enterotoxin K Virulence SaPI5 Protein 2e-89 99
sek2 NP_646755.1 enterotoxin Sek Virulence ¥ÕSa3 Protein 8e-90 97
SAMSHR1132_16740 YP_005326182.1 enterotoxin sei Virulence vSa¥â Protein 8e-68 70
sei NP_372352.1 extracellular enterotoxin type I Virulence vSa¥â Protein 1e-68 70
sei NP_374935.1 extracellular enterotoxin type I Virulence vSa¥â Protein 1e-68 70
seg2 NP_646754.1 enterotoxin SeG Virulence ¥ÕSa3 Protein 1e-55 60
unnamed AET14350.1 extracellular enterotoxin L Virulence SaPI68111 Protein 2e-48 59
sel NP_372532.1 extracellular enterotoxin L Virulence vSa4 Protein 2e-48 59
sel NP_375117.1 extracellular enterotoxin L Virulence vSa4 Protein 2e-48 59
sel YP_415866.1 enterotoxin L Not tested SaPIbov Protein 2e-48 59
sel YP_005735947.1 staphylococcal enterotoxin L Virulence SaPI1 Protein 4e-48 59
sel AAG29598.1 sel Virulence SaPIbov Protein 2e-48 59
sel2 NP_645577.1 extracellular enterotoxin L Virulence vSa3 Protein 4e-48 59
seq AAL04146.1 Seq Virulence SaPI3 Protein 1e-55 59
seq YP_493501.1 enterotoxin Q Virulence SaPI5 Protein 4e-55 59
sei YP_185758.1 enterotoxin type I Virulence vSa1 Protein 2e-55 59
entQ AAL67620.1 staphylococcal enterotoxin Q Virulence SaPI1 Protein 3e-55 59
sem NP_374936.1 enterotoxin SEM Virulence vSa¥â Protein 5e-56 58
sem NP_372353.1 enterotoxin Virulence vSa¥â Protein 5e-56 58
SAMSHR1132_16750 YP_005326183.1 enterotoxin Virulence vSa¥â Protein 7e-55 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sek YP_185757.1 enterotoxin VFG1327 Protein 3e-90 97
sek YP_185757.1 enterotoxin VFG1326 Protein 5e-56 60