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Name : SACOL0046 (SACOL0046) Accession : YP_184956.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Resistance Product : metallo-beta-lactamase Function : - COG functional category : R : General function prediction only COG ID : COG0491 EC number : - Position : 53428 - 54756 bp Length : 1329 bp Strand : - Note : identified by match to protein family HMM PF00581; match to protein family HMM PF00753 DNA sequence : ATGTTTTTTAAACAATTTTATGATAAACATTTATCTCAAGCATCTTATTTAATCGGTTGTCAAAAAACTGGAGAAGCCAT GATTATTGATCCTATTCGTGACTTATCTTCATATATTCGAGTTGCTGATGAAGAAGGTTTAACCATTACTCATGCAGCTG AAACACATATACATGCAGATTTTGCTTCAGGAATTAGAGATGTTGCTATAAAGTTAAATGCTAATATTTATGTATCGGGT GAAAGTGATGACACATTAGGTTATAAAAATATGCCTAACCACACTCATTTTGTTCAACATAATGACGATATTTATGTAGG AAATATAAAATTAAAAGTGCTTCATACACCGGGTCACACGCCAGAAAGTATAAGTTTTTTACTTACTGACGAAGGTGCTG GAGCACAAGTTCCAATGGGACTATTCAGTGGTGATTTTATTTTTGTAGGAGATATCGGTAGACCTGATTTACTAGAAAAA GCGGTTAAAGTAGAAGGATCATCTGAAATAGGCGCTAAACAAATGTTTAAATCGATTGAAAGTATTAAAGACTTGCCAGA TTACATTCAAATTTGGCCTGGCCATGGCGCTGGTAGTCCTTGTGGTAAATCTTTAGGTGCTATTCCAACATCTACTCTTG GCTATGAAAAACAAACGAACTGGGCTTTTTCTGAAAATAACGAAGCTACCTTTATCGATAAACTCATTTCTGACCAACCT GCACCACCACATCATTTTGCACAAATGAAAAAAATTAATCAATTCGGTATGAATTTATATCAACCTTATACGGTTTATCC AGCTACAAATACAAACAGATTAACTTTTGATCTCCGCAGTAAGGAGGCTTATCATGGTGGACATATTGAAGGTACAATCA ATATTCCATATGATAAAAATTTCATCAATCAAATTGGCTGGTATCTAAACTATGATCAAGAAATTAACTTGATTGGAGAC TATCACCTTGTTTCAAAAGCAACACACACCTTACAACTCATTGGATACGATGATATTGCTGGATATCAATTACCGCAATC TAAGATTCAAACACGTTCCATTCATAGTGAAGACATTACAGGTAACGAATCACATATATTAGATGTACGTAATGATAATG AATGGAATAATGGCCACTTATCTCAAGCGGTTCATGTACCACACGGCAAACTTTTAGAAACAGATTTACCTTTCAATAAA AACGATGTTATTTATGTACACTGTCAGTCTGGCATTAGAAGTTCGATAGCTATTGGTATTTTAGAACACAAAGGTTATCA CAACATTATTAATGTAAATGAAGGTTATAAAGATATACAACTTTCTTAA Protein sequence : MFFKQFYDKHLSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGLTITHAAETHIHADFASGIRDVAIKLNANIYVSG ESDDTLGYKNMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTPESISFLLTDEGAGAQVPMGLFSGDFIFVGDIGRPDLLEK AVKVEGSSEIGAKQMFKSIESIKDLPDYIQIWPGHGAGSPCGKSLGAIPTSTLGYEKQTNWAFSENNEATFIDKLISDQP APPHHFAQMKKINQFGMNLYQPYTVYPATNTNRLTFDLRSKEAYHGGHIEGTINIPYDKNFINQIGWYLNYDQEINLIGD YHLVSKATHTLQLIGYDDIAGYQLPQSKIQTRSIHSEDITGNESHILDVRNDNEWNNGHLSQAVHVPHGKLLETDLPFNK NDVIYVHCQSGIRSSIAIGILEHKGYHNIINVNEGYKDIQLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0046 | YP_184956.1 | metallo-beta-lactamase | Not tested | Type-I SCCmec | Protein | 0.0 | 100 |
| unnamed | BAA86645.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 0.0 | 100 |
| unnamed | BAB83478.1 | - | Not tested | SCC 12263 | Protein | 0.0 | 98 |
| unnamed | BAC57482.1 | hypothetical protein | Not tested | Type-IIIinv SCCmec | Protein | 1e-123 | 75 |
| SAV0046 | NP_370570.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-123 | 75 |
| SA0043 | NP_373283.1 | hypothetical protein | Not tested | Type-II SCCmec | Protein | 2e-123 | 75 |
