|
Name : SACOL0470 (SACOL0470) Accession : YP_185360.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : superantigen-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 472309 - 473367 bp Length : 1059 bp Strand : + Note : these proteins share structural homology to known superantigen proteins but do not exhibit any of the properties expected such as histocompatibility complex class II binding or broad T-cell activation DNA sequence : ATGAAAATGAGAACAATTGCTAAAACCAGTTTAGCACTAGGGCTTTTAACAACAGGCGCAATTACAGTAACGACGCAATC GGTCAAAGCAGAAAAAATACAATCAACTAAAGTTGACAAAGTACCAACGCTTAAAGCAGAGCGATTAGCAATGATAAACA TAACAGCAGGTGCAAATTCAGCGACAACACAAGCAGCTAACACAAGACAAGAACGCACGCCTAAACTCGAAAAGGCACCA AATACTAATGAGGAAAAAACCTCAGCTTCCAAAATAGAAAAAATATCACAACCTAAACAAGAAGAGCAGAAAACGCTTAA TATATCAGCAACGCCAGCGCCTAAACAAGAACAATCACAAACGACAACCGAATCCACAACGCCGAAAACTAAAGTGACAA CACCTCCATCAACAAACACGCCACAACCAATGCAATCTACTAAATCAGACACACCACAATCTCCAACCATAAAACAAGCA CAAACAGATATGACTCCTAAATATGAAGATTTAAGAGCGTATTATACAAAACCGAGTTTTGAATTTGAAAAGCAGTTTGG ATTTATGCTCAAACCATGGACGACGGTTAGGTTTATGAATGTTATTCCAAATAGGTTCATCTATAAAATAGCTTTAGTTG GAAAAGATGAGAAAAAATATAAAGATGGACCTTACGATAATATCGATGTATTTATCGTTTTAGAAGACAATAAATATCAA TTGAAAAAATATTCTGTCGGTGGCATCACGAAGACTAATAGTAAAAAAGTTAATCACAAAGTAGAATTAAGCATTACTAA AAAAGATAATCAAGGTATGATTTCACGCGATGTTTCAGAATACATGATTACTAAGGAAGAGATTTCCTTGAAAGAGCTTG ATTTTAAATTGAGAAAACAACTTATTGAAAAACATAATCTTTACGGTAACATGGGTTCAGGAACAATCGTTATTAAAATG AAAAACGGTGGGAAATATACGTTTGAATTACACAAAAAACTGCAAGAGCATCGTATGGCAGGCACTAATATTGATAACAT TGAAGTGAATATAAAATAA Protein sequence : MKMRTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERTPKLEKAP NTNEEKTSASKIEKISQPKQEEQKTLNISATPAPKQEQSQTTTESTTPKTKVTTPPSTNTPQPMQSTKSDTPQSPTIKQA QTDMTPKYEDLRAYYTKPSFEFEKQFGFMLKPWTTVRFMNVIPNRFIYKIALVGKDEKKYKDGPYDNIDVFIVLEDNKYQ LKKYSVGGITKTNSKKVNHKVELSITKKDNQGMISRDVSEYMITKEEISLKELDFKLRKQLIEKHNLYGNMGSGTIVIKM KNGGKYTFELHKKLQEHRMAGTNIDNIEVNIK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SACOL0470 | YP_185360.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 3e-138 | 100 |
| set3nm | YP_001331424.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 3e-138 | 100 |
| SAUSA300_0397 | YP_493111.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 3e-138 | 100 |
| SAS0386 | YP_042511.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-136 | 98 |
| set18 | NP_645201.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-136 | 98 |
| set8 | NP_370948.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-134 | 97 |
| set8 | NP_373634.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 2e-134 | 97 |
| SAKOR_00406 | YP_008490590.1 | Exotoxin | Virulence | vSa¥á | Protein | 5e-132 | 94 |
| SAR0425 | YP_039877.1 | superantigen-like protein | Not tested | vSa¥á | Protein | 2e-87 | 64 |
| SAMSHR1132_03740 | YP_005324896.1 | exotoxin | Virulence | vSa¥á | Protein | 2e-84 | 62 |
| SAR0424 | YP_039876.1 | superantigen-like protein | Virulence | vSa¥á | Protein | 4e-80 | 55 |
