Gene Information

Name : ssb1 (SACOL0339)
Accession : YP_185231.1
Strain : Staphylococcus aureus COL
Genome accession: NC_002951
Putative virulence/resistance : Unknown
Product : prophage L54a, single-stranded DNA binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 363651 - 364070 bp
Length : 420 bp
Strand : +
Note : identified by similarity to EGAD:17778; match to protein family HMM PF00436; match to protein family HMM TIGR00621

DNA sequence : 
ATGTTAAACAGAACAGTATTAGTAGGGCGATTAACAAAAGACCCAGAATTAAGAAGCACGCCAAATGGCGTAAATGTAGG
GACATTCACATTAGCAGTAAACAGAACATTTACAAATGCTCAAGGCGAGCGTGAAGCAGACTTTATAAACGTAGTAGTAT
TCAAAAAACAAGCTGAAAACGTTAAAAACTACCTTTCTAAAGGATCACTGGCAGGTGTAGACGGGCGATTACAAACACGC
AGTTACGATAACAAAGAAGGGCGACGTGTATTTGTGACAGAAGTAGTAGCGGACAGCGTTCAATTCTTAGAACCGAAGAA
TAACAACAAACAGAATAACCAACAACACAACGGACAAACTCAAACTGGTAATAATCCGTTCGACAATACCGAAGAAGACT
TTTCTGACTTACCGTTCTGA

Protein sequence : 
MLNRTVLVGRLTKDPELRSTPNGVNVGTFTLAVNRTFTNAQGEREADFINVVVFKKQAENVKNYLSKGSLAGVDGRLQTR
SYDNKEGRRVFVTEVVADSVQFLEPKNNNKQNNQQHNGQTQTGNNPFDNTEEDFSDLPF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAOV_0290 YP_005735807.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa1 Protein 8e-47 99
SAOV_1081 YP_005736576.1 ssDNA-binding protein Not tested ¥ÕSa2 Protein 1e-45 92
SAV0864 NP_371388.1 ssDNA-binding protein Not tested ¥ÕSa1 Protein 5e-43 86
SAOV_1956c YP_005737400.1 Single-stranded DNA-binding protein, phage associated Not tested ¥ÕSa3 Protein 2e-41 83
SH1792 YP_253707.1 single strand DNA binding protein Not tested ¥ÕSh1 Protein 6e-38 82
SEQ_0802 YP_002746140.1 single-strand binding protein Not tested ¥ÕSeq2 Protein 2e-27 62
ef0030 AAM75236.1 EF0030 Not tested Not named Protein 1e-18 44
ssb-3 NP_814291.1 single-strand binding protein Not tested Not named Protein 1e-18 44
EFAU085_00699 YP_008394223.1 single-strand binding protein Not tested Not named Protein 3e-17 41