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Name : cap1A (SACOL2687) Accession : YP_187474.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Cap1A Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3944 EC number : - Position : 2761085 - 2761747 bp Length : 663 bp Strand : - Note : identified by match to protein family HMM PF02706 DNA sequence : ATGAAAGAAAAGTTTGATTTAGTAAAACTATTAAATATTCTAAAGAAGAATATTAAATTATTGCTTATTTTACCGGCAAT ATGTCTTGTAGTAAGTGCGGCATTAACCTTTTTTGTTATGCCTGACAAATATACTGCTTCTACTCAAATATTAGTGAACA TGAAAAAGTCCTCAAGTGATTTAGCTTTCCAAAATGTTCAAAGTAGTTTGCAGTCTGTTAATACATATACGGAAATTATC AAAAGTCCTAGAATTCTAGATAAAGTATCTAGAGAATTTGATGGTCAGTATTCAACAGCTGAGTTGAATTCATTTTTAAA AGTAACCAATCAAACAAACTCTCAAATTATTACTGTATCAGTTACCACTGGGAATAAATCTGAATCTGACAAAATTGTTA ATAAAATATCTAAAGTTTTTGCTCATGACATGCCTAAAATTATGAGTGTTGATAATGTTACGATACTTTCCTCAGCACAT GATAATGCTGTAAAAGTATCTCCAATAGTATCTGTCAACTTAGTTATCAGCATTATTGTTGGTATTGTTTTAGCAATATT GATTATTTTCTTAAAAGAATTATTAGATAAGCGTATTAAGACAGAAGAAGATGTTGAATCGCAACTAGGATTACCTATTT TAGGTTCAATACAAAAATTTTAA Protein sequence : MKEKFDLVKLLNILKKNIKLLLILPAICLVVSAALTFFVMPDKYTASTQILVNMKKSSSDLAFQNVQSSLQSVNTYTEII KSPRILDKVSREFDGQYSTAELNSFLKVTNQTNSQIITVSVTTGNKSESDKIVNKISKVFAHDMPKIMSVDNVTILSSAH DNAVKVSPIVSVNLVISIIVGIVLAILIIFLKELLDKRIKTEEDVESQLGLPILGSIQKF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1A | AAA64640.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-39 | 56 |
| SSP0060 | YP_300150.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-38 | 52 |
