|
Name : cap1B (SACOL2686) Accession : YP_187473.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Cap1B Function : - COG functional category : D : Cell cycle control, cell division, chromosome partitioning COG ID : COG0489 EC number : - Position : 2760376 - 2761068 bp Length : 693 bp Strand : - Note : identified by similarity to EGAD:13148; match to protein family HMM TIGR01007 DNA sequence : ATGACGAATACACGAAGAAGTACATCAAGTTTAATTGTCCATGAACAACCAAAGTCACCTATTAGCGAGAAATTTCGAGG CATAAGATCAAATATTATGTTTGCAAATCCTGACAGTGCAGTTCAAAGCATTGTAATCACTTCAGAGGCACCAGGCGCAG GTAAGTCTACAATTGCAGCAAATTTAGCAGTTGCATATGCGCAAGCAGGTTATAAAACACTAATCGTAGACGGGGATATG CGTAAACCTACGCAGCATTATATTTTTAATTTGCCAAACAATGAAGGCCTATCAAGTTTATTGCTAAATTGGTCAACTTA TCAAGACAGTATTATCTCAACTGAAATTCAAGATTTAGACGTCTTGACGTCTGGGCCAATCCCACCGAATCCGTCAGAGT TAATTACATCAAGGGCATTTGCAAATTTGTATGACACATTATTGATGAATTATAACTTTGTAATTATCGATACGCCACCA GTGAACACAGTTACAGATGCGCAATTATTTTCAAAGTTTACCGGCAATGTTGTCTACGTAGTTAATTCGGAAAATAATAA TAGAGATGAAGTTAAAAAAGGAAAAGAACTTATTGAAGCAACAGGTGCTAAATTATTAGGTGTAGTCTTAAATAGAATGC CTAAAGATAAAAGTGCTAGTTACTATGCATATTATGGGACTGATGAATCATGA Protein sequence : MTNTRRSTSSLIVHEQPKSPISEKFRGIRSNIMFANPDSAVQSIVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDM RKPTQHYIFNLPNNEGLSSLLLNWSTYQDSIISTEIQDLDVLTSGPIPPNPSELITSRAFANLYDTLLMNYNFVIIDTPP VNTVTDAQLFSKFTGNVVYVVNSENNNRDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYAYYGTDES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 1e-67 | 60 |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 4e-58 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cap1B | YP_187473.1 | capsular polysaccharide biosynthesis protein Cap1B | VFG1298 | Protein | 4e-62 | 57 |
