|
Name : hlgA (SACOL2419) Accession : YP_187221.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : gamma-hemolysin, component A Function : - COG functional category : - COG ID : - EC number : - Position : 2478564 - 2479493 bp Length : 930 bp Strand : + Note : identified by similarity to OMNI:SA2419; match to protein family HMM PF01117; match to protein family HMM TIGR01002 DNA sequence : ATGATTAAAAATAAAATATTAACAGCAACTTTAGCAGTTGGTTTAATAGCCCCTTTAGCCAATCCATTTATAGAAATTTC TAAAGCAGAAAATAAGATAGAAGATATCGGCCAAGGTGCAGAAATCATCAAAAGAACACAAGACATTACTAGCAAACGAT TAGCTATAACTCAAAACATTCAATTTGATTTTGTAAAAGATAAAAAATATAACAAAGATGCCCTAGTTGTTAAGATGCAA GGCTTCATTAGCTCTAGAACAACATATTCAGACTTAAAAAAATATCCATATATTAAAAGAATGATATGGCCATTTCAATA TAATATCAGTTTGAAAACGAAAGACTCTAATGTTGATTTAATTAATTATCTTCCTAAAAATAAAATTGATTCAGCAGATG TTAGTCAGAAATTAGGCTATAATATCGGCGGAAACTTCCAATCAGCGCCATCAATCGGAGGCAGTGGCTCATTCAACTAC TCTAAAACAATTAGTTATAATCAAAAAAACTATGTTACTGAAGTAGAAAGTCAGAACTCTAAAGGTGTTAAATGGGGAGT GAAAGCAAATTCATTCGTTACACCGAATGGTCAAGTATCTGCATATGATCAATACTTATTTGCACAAGACCCAACTGGTC CAGCAGCACGAGACTATTTCGTCCCAGATAATCAACTACCTCCTTTAATTCAAAGTGGCTTTAATCCATCATTTATTACA ACATTGTCACACGAAAGAGGTAAAGGTGATAAAAGCGAGTTTGAAATCACTTACGGCAGAAACATGGATGCTACATATGC TTACGTGACAAGACATCGTTTAGCCGTTGATAGAAAACATGATGCTTTTAAAAACCGAAACGTTACAGTTAAATATGAAG TGAACTGGAAAACACATGAAGTAAAAATTAAAAGCATCACACCTAAGTAA Protein sequence : MIKNKILTATLAVGLIAPLANPFIEISKAENKIEDIGQGAEIIKRTQDITSKRLAITQNIQFDFVKDKKYNKDALVVKMQ GFISSRTTYSDLKKYPYIKRMIWPFQYNISLKTKDSNVDLINYLPKNKIDSADVSQKLGYNIGGNFQSAPSIGGSGSFNY SKTISYNQKNYVTEVESQNSKGVKWGVKANSFVTPNGQVSAYDQYLFAQDPTGPAARDYFVPDNQLPPLIQSGFNPSFIT TLSHERGKGDKSEFEITYGRNMDATYAYVTRHRLAVDRKHDAFKNRNVTVKYEVNWKTHEVKIKSITPK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lukE | YP_001332753.1 | leukocidin LukE precursor | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| lukE | YP_494460.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| lukE | YP_186708.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| lukE | NP_646585.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| lukE | NP_372344.1 | leukotoxin S-subunit | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| lukE | NP_374927.1 | leukotoxin LukE | Virulence | vSa¥â | Protein | 7e-106 | 71 |
| SAKOR_01768 | YP_008491956.1 | Leukocidin S subunit lukE | Virulence | vSa¥â | Protein | 6e-106 | 71 |
| lukS | NP_646196.1 | Panton-Valentine leukocidin chain S precursor | Virulence | ¥ÕSa2 | Protein | 5e-95 | 66 |
| lukS-PV | YP_494079.1 | Panton-Valentine leukocidin, LukS-PV | Virulence | ¥ÕSa2 | Protein | 5e-95 | 66 |
| SAOV_1909 | YP_005737354.1 | leukocidin chain lukM precursor | Virulence | ¥ÕSa3 | Protein | 5e-98 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hlgA | YP_187221.1 | gamma-hemolysin, component A | VFG1273 | Protein | 8e-142 | 100 |
| hlgA | YP_187221.1 | gamma-hemolysin, component A | VFG1274 | Protein | 5e-90 | 68 |
| hlgA | YP_187221.1 | gamma-hemolysin, component A | VFG1277 | Protein | 2e-95 | 66 |
