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Name : SACOL2172 (SACOL2172) Accession : - Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 2253786 - 2255410 bp Length : 1625 bp Strand : + Note : IS1272-related, transposase, degenerate; this gene contains a frame shift which is not the result of sequencing error; identified by similarity to GP:8918792 DNA sequence : ATGTATAAAAATTATAACTTGATCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAATTGATATTTCGCG ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATAAATTCAGACATCATCGTGGCGCAACATCCTATC ATCCAAAAATGATGTTAAAAATCACCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT CATGACAGTATTCGAATGATGTGGTTAGCTCAAAATCAAACACCTTCTTATAAAACTATTAATCGTATTAGAGTGAATCC TAATACTGATGCGTTAATTGAATCTTTATTTATCCAGTTTCATAGTCAATGTTTAAAGCAAAATCTTATTGATGGTACAA AAGTAGAAGCTAATGCCAATAGGTATACATTTGTGTGGAAGAAAAGTATTCAAAATCACGAATCGAAATTGAACGAAAAT TCAAAAACATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGATGGAGATAGCGATTTAACAAT AGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGGTTTAAATCATTCTATTGAGAACGAAGATAGTA CTCAAATTAGAAAACAGACCCGTAAAAAAGAACTAAGATTAAGAAGTTCAAAAATAAATTTGATGATTATTCCGAAAGAA AAAATAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAACTGATCATGATGCAACTTTTATG AGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACAAATTCTCAATTTGT TTTATCCTATGACCTATTTCAAAACCCAACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCG GTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATATGGCTATTATAGATGATTTTAAT AAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTCAACACTTAAAA TTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGTTTTAAAAGATATGCATACCGTA ATGATAGATATGGTTTTAAACGAGACTTCAAACTATATGAATGTGATGACTGTTCATCATGTTCTTTGAGACATCAATGC ATGAAACCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACTTTAAAGTCCAAATTAATCAAAA GCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCTGTTTTTGGATTTATGAAGGCTA TTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGGTTTTGTATTAATGGCACTTAAT ATAAGGAAAATAGCAGCTCAACGAGCTGTACATTATAAAATACATATCAAAAAAGCTGATTTCTATCAAATAATTAATAG AAATCAGCTTTTTTACATTGCCTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | DNA | e-246 | 85.1 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | DNA | e-246 | 84.7 |
| unnamed | - | - | Not tested | Type-I SCCmec | DNA | e-246 | 84.6 |
| unnamed | - | - | Not tested | Type-IVb SCCmec | DNA | e-246 | 84.5 |
| unnamed | - | hypothetical protein | Not tested | Type-IVa SCCmec | DNA | e-246 | 84.5 |
| unnamed | - | - | Not tested | Type-IVa SCCmec | DNA | e-246 | 84.5 |
