Gene Information

Name : pdp (SACOL2128)
Accession : YP_186943.1
Strain : Staphylococcus aureus COL
Genome accession: NC_002951
Putative virulence/resistance : Unknown
Product : pyrimidine-nucleoside phosphorylase
Function : -
COG functional category : F : Nucleotide transport and metabolism
COG ID : COG0213
EC number : 2.4.2.2
Position : 2188884 - 2190185 bp
Length : 1302 bp
Strand : -
Note : Catalyzes the reversible phosphorolysis of pyrimidines in the nucleotide synthesis salvage pathway

DNA sequence :
ATGAGAATGATAGACATTATTGAGAAAAAGCGTGACGGTCATACACTAACAACGGAAGAAATTAATTTCTTTATTGGCGG
CTATGTTAAAGGGGATATTCCTGATTACCAAGCATCAAGTTTAGCAATGGCGATTTATTTCCAAGATATGAATGATGATG
AGCGTGCAGCATTAACGATGGCTATGGTTAATTCTGGTGATATGATAGATTTGAGTGATATTAAAGGTGTCAAAGTAGAT
AAGCACTCAACAGGTGGTGTAGGAGATACAACTACATTGGTTTTAGCACCATTAGTAGCAGCTGTAGATGTTCCTGTTGC
AAAAATGAGTGGGCGTGGATTAGGTCATACAGGTGGTACGATTGATAAATTAGAAGCAATTGATGGTTTTCATGTTGAAA
TAGATGAAGCAACATTTGTGAAATTGGTTAATGAAAATAAAGTGGCAGTTGTAGGACAATCAGGAAATTTAACTCCTGCA
GACAAAAAATTATATGCCTTAAGGGATGTTACTGGTACTGTCAATTCAATACCATTAATTGCCTCTTCAATTATGAGTAA
AAAGATTGCTGCTGGTGCAGATGCAATTGTATTAGATGTAAAAACTGGTAGCGGTGCATTTATGAAAACATTAGAAGATG
CTGAAGCATTAGCGCACGCAATGGTACGTATTGGTAATAATGTGGGACGTAATACGATGGCGATTATTTCTGATATGAAT
CAGCCACTTGGACGTGCGATTGGCAATGCGCTTGAGTTACAAGAAGCAATTGATACGTTGAAAGGACAAGGTCCGAAAGA
TTTAACAGAACTTGTATTAACATTAGGTTCTCAAATGGTTGTACTTGCAAACAAAGCTGAAACGCTTGAAGAAGCGAGAG
CGTTGCTAATTGAGGCAATTAATTCAGGTGCAGCATTAGAAAAATTCAAAACATTTATTAAAAACCAAGGTGGCGACGAA
ACTGTTATTGACCATCCAGAGCGTTTGCCACAAGCTCAATATCAAATTGAATATAAAGCTAAAAAATCAGGTTATGTGAC
TGAATTAGTCTCTAACGATATAGGTGTCGCTTCGATGATGTTAGGAGCGGGACGTTTAACAAAAGAGGATGATATTGATT
TAGCGGTTGGTATTGTTTTAAATAAAAAAATTGGTGATAAAGTAGAAGAAGGAGAATCATTATTAACGATTCACAGTAAT
CGCCAAGATGTAGACGATGTTGTTAAAAAATTAGATTCAAGCATAACAATTGCTGATCATGTTGTATCGCCTACATTAAT
TCATAAAATCATTACAGAATAG

Protein sequence :
MRMIDIIEKKRDGHTLTTEEINFFIGGYVKGDIPDYQASSLAMAIYFQDMNDDERAALTMAMVNSGDMIDLSDIKGVKVD
KHSTGGVGDTTTLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEATFVKLVNENKVAVVGQSGNLTPA
DKKLYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDAEALAHAMVRIGNNVGRNTMAIISDMN
QPLGRAIGNALELQEAIDTLKGQGPKDLTELVLTLGSQMVVLANKAETLEEARALLIEAINSGAALEKFKTFIKNQGGDE
TVIDHPERLPQAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIHSN
RQDVDDVVKKLDSSITIADHVVSPTLIHKIITE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
deoA YP_005163381.1 Thymidine phosphorylase Not tested Not named Protein 5e-74 47