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Name : SACOL2004 (SACOL2004) Accession : YP_186827.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : leukocidin subunit precursor Function : - COG functional category : - COG ID : - EC number : - Position : 2064956 - 2065828 bp Length : 873 bp Strand : - Note : identified by match to protein family HMM PF01117; match to protein family HMM TIGR01002 DNA sequence : ATGTATACACGTACAGCTACAACAAGTGATAGTCAAAAAAATATTACTCAAAGCTTACAATTTAATTTCTTAACTGAACC TAATTATGATAAAGAAACAGTATTTATTAAAGCAAAAGGTACAATTGGTAGTGGTTTGAGAATTTTAGACCCAAATGGTT ATTGGAATAGTACATTAAGATGGCCTGGATCTTATTCAGTTTCAATTCAAAATGTTGATGACAACAACAATACAAATGTG ACTGACTTTGCACCAAAAAATCAGGATGAATCAAGAGAAGTTAAATATACGTATGGTTATAAAACAGGTGGAGATTTTTC GATTAATCGTGGAGGCTTAACTGGAAATATTACAAAAGAGAGTAATTATTCAGAGACGATTAGTTATCAACAACCATCAT ATCGTACATTACTTGATCAATCTACGTCACATAAAGGTGTAGGTTGGAAAGTAGAAGCACATTTGATAAATAATATGGGA CATGACCATACGAGACAATTAACTAATGATAGTGATAATAGAACTAAAAGTGAAATTTTTTCTTTAACACGAAATGGAAA TTTATGGGCGAAAGATAATTTCACACCTAAAGACAAAATGCCTGTAACTGTGTCTGAAGGGTTTAATCCAGAATTTTTAG CTGTTATGTCACATGATAAAAAAGACAAAGGTAAATCACAATTTGTTGTTCATTATAAAAGATCAATGGATGAGTTTAAA ATAGATTGGAATCGCCATGGTTTCTGGGGCTATTGGTCTGGTGAAAACCATGTAGATAAAAAAGAAGAAAAATTATCAGC ATTATATGAAGTTGATTGGAAGACACATAATGTGAAGTTTGTAAAAGTACTTAATGATAATGAAAAGAAATAA Protein sequence : MYTRTATTSDSQKNITQSLQFNFLTEPNYDKETVFIKAKGTIGSGLRILDPNGYWNSTLRWPGSYSVSIQNVDDNNNTNV TDFAPKNQDESREVKYTYGYKTGGDFSINRGGLTGNITKESNYSETISYQQPSYRTLLDQSTSHKGVGWKVEAHLINNMG HDHTRQLTNDSDNRTKSEIFSLTRNGNLWAKDNFTPKDKMPVTVSEGFNPEFLAVMSHDKKDKGKSQFVVHYKRSMDEFK IDWNRHGFWGYWSGENHVDKKEEKLSALYEVDWKTHNVKFVKVLNDNEKK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlgB | YP_005326172.1 | gamma-hemolysin component B (fragment) | Virulence | vSa¥â | Protein | 1e-16 | 41 |
| lukD | NP_374926.1 | leukotoxin, LukD | Virulence | vSa¥â | Protein | 1e-39 | 41 |
| lukD | YP_186707.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 9e-40 | 41 |
| lukD | NP_646584.1 | leukotoxin | Virulence | vSa¥â | Protein | 9e-40 | 41 |
| lukD | YP_001332752.1 | leukocidin LukD precursor | Virulence | vSa¥â | Protein | 9e-40 | 41 |
| lukD | YP_494459.1 | leukotoxin LukD | Virulence | vSa¥â | Protein | 9e-40 | 41 |
| SAKOR_01767 | YP_008491955.1 | Leukocidin F subunit lukD | Virulence | vSa¥â | Protein | 1e-39 | 41 |
| lukD | NP_372343.2 | leukotoxin F-subunit | Virulence | vSa¥â | Protein | 1e-39 | 41 |
