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Name : SACOL1834 (SACOL1834) Accession : - Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Unknown Product : - Function : - COG functional category : - COG ID : - EC number : - Position : 1887817 - 1889426 bp Length : 1610 bp Strand : + Note : IS1272-related, transposase, degenerate; this gene contains a frame shift which is not the result of sequencing error;identified by similarity to GP:8918792 DNA sequence : CAACTTACACTACCAATAGAAACCTCTGTTAGAATTCCTCAAAATGATATTTCGCGATATGTTAATGAAATTGTTGAAAC GATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATCATCCAAAAATGATGTTAAAAATCA TCTTATATGCATATACTCAATCTGTATTTTCTGGTCGAAGAATAGAGAAATTACTTCATGACAGTATTCGAATGATGTGG TTAGCTCAAAATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCCTAATACTGATGCGTTAATTGAATC TTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGATAATAATTCAATTTTTATTGATGGTACAAAAG TAGAAGCTAATGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCACGAATCGAAATTGAACGAAAATTCA AAAGCATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGATGGAGATAGCGATTTAACAATAGA AGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATTCTATTGAGAACGAAGATTGTGCTC AAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAATTTGATGATTATTCCGAAAGAAAA AATAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGTTTTTCTAAAACTGATCATGATGCAACTTTTATGAG AATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAATAGCGACAAATTCTCAATTTGTTT TATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTAACAATGATTCAAAATACCTTCGGT TATTTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATATGGCCATTATAGATGATTTTAATAAAACGCCACTTATT ACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAAGTGACATTTTCAACACTCAAAATTGGAAATATGACGA ACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGTTTTAAAAGATATGCATACCGTAATGATAGATATGGTT TTAAACGAGACTTCAAACTATATGAATGCGATGACTGTTCAGCATGTTCTTTGAGGCAACAATGCATGAAACCAAATTCA AAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACTTTAAAGTCCAAATTAATCAAAAGCTTTCTGAACCAGA AACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCTGTTTTTGGATTTATGAAGGCTATTTTGGGTTTAACTC GAACGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGGTTTTGTATTAATGGCACTTAATATAAGGAAAATAGCA GCTCAACGAGCTGTACATTATAAAATACATATCAAAAAAGCTGATTTCTATCAAATAATTAATAGAAATCAGCTTTTTTA CATCGCCTAA Protein sequence : - |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | DNA | e-236 | 85.7 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | DNA | e-233 | 83.2 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | DNA | e-233 | 83.2 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | DNA | e-233 | 83.2 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | DNA | e-233 | 83.2 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | DNA | e-233 | 83.2 |
| unnamed | - | - | Not tested | Type-IIIinv SCCmec | DNA | e-233 | 83.1 |
| unnamed | - | - | Not tested | Type-I SCCmec | DNA | e-233 | 83 |
| unnamed | - | hypothetical protein | Not tested | Type-IVa SCCmec | DNA | 0.0 | 82.7 |
| unnamed | - | - | Not tested | Type-IVa SCCmec | DNA | 0.0 | 82.7 |
| unnamed | - | - | Not tested | Type-IVb SCCmec | DNA | 0.0 | 82.7 |
