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Name : cap5C (SACOL0138) Accession : YP_185038.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Cap5C Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG4464 EC number : - Position : 154778 - 155542 bp Length : 765 bp Strand : + Note : identified by match to protein family HMM PF02811 DNA sequence : ATGATTGATATTCATAACCATATATTGCCTAATATCGATGACGGTCCGACAAATGAAACAGAGATGATGGATCTTTTAAA ACAAGCGACAACACAAGGTGTTACAGAAATCATTGTAACATCACATCACTTACATCCTCGATATACCACACCTATAGAAA AAGTGAAATCATGTTTAAACCATATTGAAAGCTTAGAGGAAGTACAAGCACTAAATCTAAAGTTTTATTATGGTCAGGAA ATAAGAATTACCGATCAAATCCTTAATGATATTGATCGAAAAGTTATTAACGGTATTAATGATTCACGCTATTTACTAAT AGAATTTCCATCAAATGAAGTTCCACACTATACTGATCAATTATTTTTCGAATTACAGAGTAAAGGCTTTGTACCGATTA TTGCACATCCAGAGCGGAATAAAGCAATAAGTCAAAACCTTGACATACTATACGATTTAATTAACAAAGGTGCTTTAAGT CAAGTGACAACGGCGTCATTAGCGGGTATTTCCGGTAAAAAAATTAGAAAATTAGCAATTCAAATGATTGAAAACAATCT GACACATTTCATCGGTTCAGATGCGCATAACACAGAAATCAGACCGTTCTTAATGAAAGACTTATTTAATGATAAGAAAT TACGTGATTATTATGAAGATATGAACGGATTTATTAGTAATGCGAAGTTAGTTGTTGATGATAAAAAAATTCCTAAACGA ATGCCACAACAAGATTATAAACAGAAAAGATGGTTTGGGTTATAA Protein sequence : MIDIHNHILPNIDDGPTNETEMMDLLKQATTQGVTEIIVTSHHLHPRYTTPIEKVKSCLNHIESLEEVQALNLKFYYGQE IRITDQILNDIDRKVINGINDSRYLLIEFPSNEVPHYTDQLFFELQSKGFVPIIAHPERNKAISQNLDILYDLINKGALS QVTTASLAGISGKKIRKLAIQMIENNLTHFIGSDAHNTEIRPFLMKDLFNDKKLRDYYEDMNGFISNAKLVVDDKKIPKR MPQQDYKQKRWFGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1C | AAA64642.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-82 | 60 |
| SSP0062 | YP_300152.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 7e-64 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cap5C | YP_185038.1 | capsular polysaccharide biosynthesis protein Cap5C | VFG1299 | Protein | 1e-118 | 99 |
