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Name : cap5B (SACOL0137) Accession : YP_185037.1 Strain : Staphylococcus aureus COL Genome accession: NC_002951 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein Cap5B Function : - COG functional category : D : Cell cycle control, cell division, chromosome partitioning COG ID : COG0489 EC number : - Position : 154089 - 154775 bp Length : 687 bp Strand : + Note : identified by match to protein family HMM TIGR01007 DNA sequence : ATGTCAAAAAAGGAAAATACGACAACAACACTATTTGTATATGAAAAACCAAAATCAACAATTAGTGAAAAGTTTCGAGG TATACGTTCAAACATCATGTTTTCAAAAGCAAATGGTGAAGTAAAGCGCTTATTGGTTACTTCTGAAAAGCCTGGTGCAG GTAAAAGTACAGTTGTATCGAATGTAGCGATTACTTATGCACAAGCAGGCTATAAGACATTAGTTATTGATGGCGATATG CGTAAGCCAACACAAAACTATATTTTTAATGAGCAAAATAATAATGGACTATCAAGCTTAATCATTGGTCGAACGACTAT GTCAGAAGCAATTACGTCGACAGAAATTGAAAATTTAGATTTGCTAACAGCTGGCCCTGTACCTCCAAATCCATCTGAGT TAATTGGGTCTGAAAGGTTCAAAGAATTAGTTGATCTGTTTAATAAACGTTACGACATTATTATTGTCGATACACCGCCA GTTAATACTGTGACTGATGCACAACTATATGCGCGTGCTATTAAAGATAGTCTGTTAGTAATTGATAGTGAAAAAAATGA TAAAAATGAAGTTAAAAAAGCAAAAGCACTTATGGAAAAAGCAGGCAGTAACATTCTAGGTGTCATTTTGAACAAGACAA AGGTCGATAAATCTTCTAGTTATTATCACTATTATGGAGATGAATAA Protein sequence : MSKKENTTTTLFVYEKPKSTISEKFRGIRSNIMFSKANGEVKRLLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDM RKPTQNYIFNEQNNNGLSSLIIGRTTMSEAITSTEIENLDLLTAGPVPPNPSELIGSERFKELVDLFNKRYDIIIVDTPP VNTVTDAQLYARAIKDSLLVIDSEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSSYYHYYGDE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1B | AAA64641.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 3e-73 | 64 |
| SSP0061 | YP_300151.1 | capsular polysaccharide synthesis protein | Not tested | SCC15305cap | Protein | 5e-62 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| cap5B | YP_185037.1 | capsular polysaccharide biosynthesis protein Cap5B | VFG1298 | Protein | 4e-102 | 99 |
