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Name : serS (PG0316) Accession : NP_904632.1 Strain : Porphyromonas gingivalis W83 Genome accession: NC_002950 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 348577 - 349848 bp Length : 1272 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGCTGACACTCAAGCAAATCATAGAAAACAAGGAAGAAGTGATCCGTCGCTTGGCGGTGAAGCACTTCGATGCAGCTGC TATTCTCGACGAAGTCATCTCTCTCGACAGACAGCGACGCGAAACTCAACAGAGTCTGGATGCTCGCTTGGCGGAGCAAA ACGCCATTGCCAAGGAGATCGGAGCTTTGATGAAAGCCGGCAAGAAAGACGAGGCAGAGGCCATCCGTGCGAAAGTAGCC GATATGAAAGCCGGGAGCCACCATCTGGAAGAGCGGAAAGCTGATCTGGAGAATGCTATACGCCAACAGCTTCTGCTTAT CCCGAATCTGCCGCATGAGTCTGTCCCTGCAGGCAAGACCGCAGAGGAGAATGTCTGTGTGAAGACAGGCGGCACAGTGC CGGAGCTTGGAACGCACAAGCTCCCACATTGGGATCTGGCCAAGAAATACGATCTGATCGACTTCGAACTCGGCGTCAAG ATAACCGGAGCAGGCTTCCCTGTCTATAAGGGCAAAGGAGCACGCCTGCAGCGAGCTTTGGTCAACTTCTTCTTGGATGA AGCCCGCAACGCCGGCTTCACGGAGATAGAGCCGCCCTATGTAGTCAATGAGGATTCCGGCTACGGTACGGGACAGCTCC CTGACAAGGAAGGGCAGATGTACCATGTCACGGCGGACAACCTGTATCTGATCCCCACGGCAGAGGTGCCGGTGACCAAT ATCTTCCGCGATGTCATTCTCTCCGAGGACGAATTGCCCATTCTCCTGACCGCTTACTCGGCTTGCTTCCGACGCGAAGC CGGTTCGTACGGCAAGGATGTTCGCGGTCTGAACCGCCTCCATCAGTTCAACAAGGTGGAGATCGTCTGCATCGACAAGC CCGAACACTCCTACGAACAGCTCGATCAGATGGTCGGCTATGTCCAAGGCCTTGTAGATAAGTTGGGACTTCCGTGGCGT ATCCTTCGCCTCTGCGGCGGAGATATCAGCTTCACTTCGGCATTGACTTACGATTTCGAAGTCTATTCGGCTGCCCAAGA GCGGTGGTTGGAGGTTAGCTCGGTGTCCAATTTCGAGAGCTTCCAAGCCAATCGTCTGAAGTGCCGTTATCGCAATGCGG ATAAGAAAGTGGAGCTTTGCCACACGCTCAACGGTAGTGCCTTGGCCTTGCCGCGTATCGTGGCTGCTCTGCTGGAAAAC AATCAGACAGCCGATGGCATCCGCATCCCCGACTGTCTGGTGCCTTATACAGGCTTCTCGATGATCGATTGA Protein sequence : MLTLKQIIENKEEVIRRLAVKHFDAAAILDEVISLDRQRRETQQSLDARLAEQNAIAKEIGALMKAGKKDEAEAIRAKVA DMKAGSHHLEERKADLENAIRQQLLLIPNLPHESVPAGKTAEENVCVKTGGTVPELGTHKLPHWDLAKKYDLIDFELGVK ITGAGFPVYKGKGARLQRALVNFFLDEARNAGFTEIEPPYVVNEDSGYGTGQLPDKEGQMYHVTADNLYLIPTAEVPVTN IFRDVILSEDELPILLTAYSACFRREAGSYGKDVRGLNRLHQFNKVEIVCIDKPEHSYEQLDQMVGYVQGLVDKLGLPWR ILRLCGGDISFTSALTYDFEVYSAAQERWLEVSSVSNFESFQANRLKCRYRNADKKVELCHTLNGSALALPRIVAALLEN NQTADGIRIPDCLVPYTGFSMID |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 1e-73 | 45 |
