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Name : thiC (PG2110) Accession : NP_906170.1 Strain : Porphyromonas gingivalis W83 Genome accession: NC_002950 Putative virulence/resistance : Unknown Product : thiamine biosynthesis protein ThiC Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0422 EC number : - Position : 2219539 - 2221302 bp Length : 1764 bp Strand : - Note : required for the synthesis of the hydromethylpyrimidine moiety of thiamine DNA sequence : ATGAAAGAATTCAAAGTGACTACCGGTCCTCTGCCCGGCAGTGAGAAAATCTATGTCGAAGGAGAGCGTTTCCCCTTCTT GCGCGTACCGATGCGGCGCATCCGAATGTCCGACACCATATTGGAGAACGGCGAACGTGAGAAAAACGAAGATGTAGTCG TATACGATACCAGTGGCCCCTATACCGATACCTCCTATGAGGTGAATCTGCACCGAGGCGTACCGAAGATACGCGAGCAG TGGATAGAGGATCGGGGCGATACGGTGCGGCTCGAAGGGCTCAGCTCCGAATACGGACGGATAAGGCAGTCGGACGCTTC GCTCGAAAAGCTGCGTTACGAGCATGTGTGCACGCGTCCCCGTGCCGCCAAGGACGGCTGTGCCACGCAGCTCTACTACG CCCGTCAGGGGATCGTGACGCCGGAGATGGAGTTCGTGGCCATCCGCGAAAATCAGTTGATCGATCAGGTCAGGACGCGC TATCGCGCTGAGGAGGGTGAGCCGCTCGGAGCTGTTATTCCGCGCAAGATCACGCCCGAATTTGTACGCGACGAGATTGC CGCCGGACGGGCTATCCTTCCGGCCAATATCAATCATCCGGAAAGTGAGCCGATGATCATCGGGCGCAATTTCCTCGTCA AGATCAATGCGAACATAGGCAATTCGCCCATCAGCAGTACCATCGAGGAAGAGGTGGAAAAGGCCGTCTGGGCCATACGC TGGGGTGCCGATACGGTCATGGATCTCTCCACGGGGGATCATATCCATGAGACGCGCGAGTGGATCATCCGCAATTCGCC CGTGCCCATCGGCACTGTGCCCCTCTACCAGACGCTGGAGAAGGTGCAGGGCGATGTGACGAAGCTCAACTGGGAGATAT TCCGCGATACGCTCATCGAGCAGGCCGAGCAGGGTGTGGACTACTTCACCATCCACGCCGGTCTGCGTTGGCACCACGTG CCTCTGACCTTGCGCCGCCTCACGGGGATCGTCTCCCGCGGTGGTTCCATCATCGCCAACTGGTGCACCACCCACAAGCG CGAAAGTTTCATCTACGAGCATTTCGAAGAGATCTGCCAAATCCTCGCACGCTACGACGTAGCCATATCTCTCGGCGATG GCTTGCGCCCGGGCTGCATCCACGACGCCAACGATGCTGCGCAGATAGCTGAGCTGAAGACGCTGGGCGAACTTACCGAG ATCGCTTGGAAGTATAACGTGCAAACCATTATCGAAGGACCGGGACACGTGCCCATGCACAAGATCCGCGAGAATATGGA GATTCAACTCGAAGCCTGCCATGGCGCACCCTTCTACACTCTCGGCCCGTTGGTCAGCGACGTGGCGTCCGGCTACGACC ATATCACATCGGCTATCGGCGCGGCACAGATCGGATGGTTCGGCACAGCCATGCTCTGCTATGTGACGCAAAAGGAGCAT TTGGGTCTGCCCAACCGCGAAGATGTACGTGAAGGTGTAGTAACCTATAGACTGGCTGCTCATGCCGCCGACTTGGCCAA AGGACACCCCACGGCGTACTGGCGCGACTATATGATGAGCAAGGCGCGGTTCGAATTCCGCTGGAAGGATCAGTTCCATC TCTCGCTTGATCCAGAGAAAGCGATCCAATTCCACGATGCCACGCTGCCGGACGAAGGCCACAAAGAGGCGCATTTCTGC TCCATGTGCGGCGAACACTTCTGCTCCATGCGTGCCAATAAGAACTTCCGCAAGTTGCTAAACGAAGAGGCAGTCTCCAA ATGA Protein sequence : MKEFKVTTGPLPGSEKIYVEGERFPFLRVPMRRIRMSDTILENGEREKNEDVVVYDTSGPYTDTSYEVNLHRGVPKIREQ WIEDRGDTVRLEGLSSEYGRIRQSDASLEKLRYEHVCTRPRAAKDGCATQLYYARQGIVTPEMEFVAIRENQLIDQVRTR YRAEEGEPLGAVIPRKITPEFVRDEIAAGRAILPANINHPESEPMIIGRNFLVKINANIGNSPISSTIEEEVEKAVWAIR WGADTVMDLSTGDHIHETREWIIRNSPVPIGTVPLYQTLEKVQGDVTKLNWEIFRDTLIEQAEQGVDYFTIHAGLRWHHV PLTLRRLTGIVSRGGSIIANWCTTHKRESFIYEHFEEICQILARYDVAISLGDGLRPGCIHDANDAAQIAELKTLGELTE IAWKYNVQTIIEGPGHVPMHKIRENMEIQLEACHGAPFYTLGPLVSDVASGYDHITSAIGAAQIGWFGTAMLCYVTQKEH LGLPNREDVREGVVTYRLAAHAADLAKGHPTAYWRDYMMSKARFEFRWKDQFHLSLDPEKAIQFHDATLPDEGHKEAHFC SMCGEHFCSMRANKNFRKLLNEEAVSK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00317 | YP_008207782.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR25 | Protein | 0.0 | 65 |
| BJAB0868_00321 | YP_008211647.1 | Thiamine biosynthesis protein ThiC | Not tested | AbaR26 | Protein | 0.0 | 65 |
| thiC | YP_001598318.1 | thiamine biosynthesis protein ThiC | Not tested | MDA | Protein | 1e-180 | 63 |
