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Name : clpC (PG0010) Accession : NP_904369.1 Strain : Porphyromonas gingivalis W83 Genome accession: NC_002950 Putative virulence/resistance : Virulence Product : ATP-dependent Clp protease, ATP-binding subunit ClpC Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 8915 - 11494 bp Length : 2580 bp Strand : + Note : similar to GB:J05272, SP:P20839, PID:307067, GB:J05272, SP:P20839, and PID:307067; identified by sequence similarity; putative DNA sequence : ATGGCATACGACTTTACACAAACATTCCGCAACAGCCTGGAGTACAGCTATCAGGAAGCAACCCGTCTCGGCGTCGTAGC CGTGACGCAAGATATGCTCGTACTCGGTATCATTCGCGACGGAGACAATGGCGCGATCGACATCATGCGGCACTATGGGA TCAACTTGTACGAACTCAAACGGTTGATCGAGTTGGAAGCCATCGCCGAGAGTTTGCCTGCTTCGCCTGAGGGATCGCCC ATCTTCACCCCTTCGGCTCGGGAGGCTATCGATGATGCCACAGACATCTGTGCCGACATGGAGGACGAGGCCGTCAGCCC GGTCCATCTGTTGCTGAGTATCCTCAACTCGACACAGGAGAGCTTAGTACAAAAGATATTTATGAAACAAGGTATAAAAT ACGACACCATCCTGTCGGATTACTTCGGACAGCGCAACCCCTCCGAAGGGAAGTCTCCCTCCGAAATGGAGATCCTCGAC GGGTACCAAGACAACGACTTCGACGACGAAGAGGACGAATCCTCTCCGCCTTCCGGGAATAGCGGGACAGGCGGAGGCTC CGGCGACGCCCCCGAACAGAATACCGGCGGAGGCGATACTACCACCACGACACGGAGTGGAGGCGACACGCCTGCACTGG ACACCTTCGGCACCGACATCACTGCCATGGCGGCAGCAGGCAAGCTCGACCCGGTAGTGGGTCGGGAGCAGGAGATCGAA AGGGTGATACAGATACTCAGCCGGCGCAAAAAGAACAATCCGGTGCTCATCGGCGAACCCGGTGTAGGCAAGAGTGCCAT CGTGGAAGGACTGGCCGAACGCATCGTGAACAGGAAGGTGAGCCGTATTCTTTTCGACAAGCGGATCATCAGCCTCGATT TGGCTCAGATGGTAGCCGGCACCAAATATCGCGGACAGTTCGAAGAGCGGTTGAAAGCCGTGCTCGATGAGCTGAAGAAG AATCCGCAGATCATCCTCTTCATCGACGAGATACATACCATCGTGGGAGCAGGCTCTGCAGCCGGATCGATGGATACGGC CAATATGCTCAAACCCGCTCTTGCCCGTGGACAGGTACAGTGCATCGGAGCCACTACGCTGGATGAGTATCGTAAGAACA TAGAAAAGGACGGAGCACTCGAACGCCGCTTCCAGAAGGTGCCGATAGCCCCCTCGACTGCAGAAGAAACGCTGACCATC CTGCAAAACATCAAAGAGAAATACGAGGACTATCACGGTGTACGCTATACGGACGAAGCGATCAAAGCGGCAGTGGAACT GACCGATCGCTATGTATCCGATCGTTTCTTCCCAGATAAGGCGATAGATGCCATGGACGAGGCCGGCGCGAGCGTCCATA TCACCAATGTGGTGGCTCCGAAAGAAATCGAGATACTGGAGGCCGAATTGGCATCGGTGCGAGAGAACAAGCTCTCGGCC GTAAAGGCTCAGAACTACGAACTGGCTGCCTCCTTCCGCGATCAGGAGCGGCGCACTCAGCAGCAGATAGCGGAAGAGAA GAAAAAATGGGAAGAGCAGATGTCCAAGCACCGCGAGACGGTGGACGAGAATGTAGTGGCGCATGTAGTGGCGTTGATGA CAGGCGTTCCGGCTGAGCGGCTGAGCACGGGCGAAGGCGAACGTCTGCGCACGATGGCAGATGATCTCAAGACCAAAGTA GTAGGTCAGGACACAGCCATCGAAAAGATGGTGCATGCCATCCAGCGCAATCGTCTGGGACTTCGCAATGAAAAGAAACC GATCGGTTCTTTCCTTTTCCTCGGCCCCACGGGGGTAGGCAAGACCTATTTGGCCAAGAAGCTCGCCGAATACCTGTTCG AGGATGAGAATGCCATGATCAGGGTGGATATGAGCGAGTATATGGAGAAGTTCTCCGTTTCGCGTCTCGTGGGTGCCCCT CCGGGATATGTGGGCTATGAAGAAGGCGGCCAACTGACGGAGCGCGTAAGACGCAAACCCTATTCCGTGGTTCTCTTGGA TGAGATCGAAAAGGCGCATGCCGATGTCTTCAATCTGCTCTTACAGGTGATGGACGAAGGTCAGCTGACCGACAGTCTGG GACGGCGCGTGAATTTCAAGAACACCGTGATCATCATCACCTCCAACGTGGGTACACGCCAGCTCAAAGACTTCGGGCAG GGTATCGGGTTCCGTTCGGAAAAAGACGAGGAAGCGAACAAGGAGCATAGCCGTTCCGTGATCCAAAAAGCTCTGAACAA GACGTTCAGCCCCGAATTTCTCAACCGTTTGGACGATATCATCCTCTTCGACCAACTGGGCAAGACGGAGATTCGCCGGA TGGTGGACATAGAGCTTAAAGCCGTCTTGGCGCGCATCCATCGTGCCGGATACGACCTCGTCCTTACCGATGAAGCCAAG GATGTGATAGCGACGAAGGGATACGACCTCCAATACGGAGCACGACCGCTCAAGCGCACACTCCAGAACGAAGTGGAGGA TCGCCTCACGGATCTTATCCTCTCCGGACAGATCGAGAAAGGGCAGACGCTTACGCTCTCTGCTCGCGATGGCGAGATCA TCGTACAAGAACAAGCATAA Protein sequence : MAYDFTQTFRNSLEYSYQEATRLGVVAVTQDMLVLGIIRDGDNGAIDIMRHYGINLYELKRLIELEAIAESLPASPEGSP IFTPSAREAIDDATDICADMEDEAVSPVHLLLSILNSTQESLVQKIFMKQGIKYDTILSDYFGQRNPSEGKSPSEMEILD GYQDNDFDDEEDESSPPSGNSGTGGGSGDAPEQNTGGGDTTTTTRSGGDTPALDTFGTDITAMAAAGKLDPVVGREQEIE RVIQILSRRKKNNPVLIGEPGVGKSAIVEGLAERIVNRKVSRILFDKRIISLDLAQMVAGTKYRGQFEERLKAVLDELKK NPQIILFIDEIHTIVGAGSAAGSMDTANMLKPALARGQVQCIGATTLDEYRKNIEKDGALERRFQKVPIAPSTAEETLTI LQNIKEKYEDYHGVRYTDEAIKAAVELTDRYVSDRFFPDKAIDAMDEAGASVHITNVVAPKEIEILEAELASVRENKLSA VKAQNYELAASFRDQERRTQQQIAEEKKKWEEQMSKHRETVDENVVAHVVALMTGVPAERLSTGEGERLRTMADDLKTKV VGQDTAIEKMVHAIQRNRLGLRNEKKPIGSFLFLGPTGVGKTYLAKKLAEYLFEDENAMIRVDMSEYMEKFSVSRLVGAP PGYVGYEEGGQLTERVRRKPYSVVLLDEIEKAHADVFNLLLQVMDEGQLTDSLGRRVNFKNTVIIITSNVGTRQLKDFGQ GIGFRSEKDEEANKEHSRSVIQKALNKTFSPEFLNRLDDIILFDQLGKTEIRRMVDIELKAVLARIHRAGYDLVLTDEAK DVIATKGYDLQYGARPLKRTLQNEVEDRLTDLILSGQIEKGQTLTLSARDGEIIVQEQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 1e-165 | 52 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpC | NP_904369.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0079 | Protein | 4e-177 | 54 |
| clpC | NP_904369.1 | ATP-dependent Clp protease, ATP-binding subunit ClpC | VFG0080 | Protein | 2e-148 | 49 |
