Gene Information

Name : rph (PP_5294)
Accession : NP_747395.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 6041192 - 6041914 bp
Length : 723 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGAAACGTCCAAGTGGTCGCGTTGCCGATCAGCTCCGCTCGATCCGCATCACCCGCAACTACACCAAGCACGCCGAAGG
GTCGGTACTGGTCGAGTTCGGTGACACCAAAGTCATCTGCACGGTCAGCGTTGAAAACGGTGTACCGCGCTTCCTCAAAG
GCCAGGGCCAAGGCTGGCTGACCGCCGAGTATGGCATGCTGCCGCGCTCCACCGGCGAACGTAACCAGCGCGAAGCCAGC
CGTGGCAAGCAGGGTGGCCGCACCCTGGAAATCCAGCGCCTGATCGGCCGTTCGCTGCGCGCCGCGCTGGACATGAGCAA
GCTCGGTGACATCACCCTGTACGTCGATTGCGACGTGATCCAGGCCGATGGCGGTACCCGTACCGCGTCCATCACCGGCG
CCATGGTTGCCTTGTGCGACGCTTTGGCAGTGATCAAGAAGCGCGGCGGCCTCAAGGGCGGCAACCCGCTCAAGCACATG
ATCGCTGCCGTGTCGGTAGGCATGTATCAGGGCGAAGCGGTGCTCGACCTGGACTACCTGGAAGACTCCGCAGCCGAAAC
CGACCTGAATGTGGTCATGACCAGCGCTGGTGGTTTCATCGAAGTGCAGGGTACTGCCGAAGGCGCACCGTTCCAGCCGG
AAGATTTCAACGCCATGCTCGCTTTGGCGCAGAAGGGCATGAACGAGATTTTCGAGCTGCAGCAGGCAGCACTGGCTGAC
TGA

Protein sequence :
MKRPSGRVADQLRSIRITRNYTKHAEGSVLVEFGDTKVICTVSVENGVPRFLKGQGQGWLTAEYGMLPRSTGERNQREAS
RGKQGGRTLEIQRLIGRSLRAALDMSKLGDITLYVDCDVIQADGGTRTASITGAMVALCDALAVIKKRGGLKGGNPLKHM
IAAVSVGMYQGEAVLDLDYLEDSAAETDLNVVMTSAGGFIEVQGTAEGAPFQPEDFNAMLALAQKGMNEIFELQQAALAD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 8e-64 59