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Name : ribD (PP_0514) Accession : NP_742677.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : riboflavin biosynthesis protein RibD Function : - COG functional category : H : Coenzyme transport and metabolism COG ID : COG0117 EC number : - Position : 600648 - 601784 bp Length : 1137 bp Strand : + Note : similar to GB:L08176, GB:L31582, GB:L31583, GB:L31584, GB:L31581, SP:P32248, PID:183485, PID:468316, and PID:468320; identified by sequence similarity DNA sequence : GTGAACATGCCCAGCCAAGCCGCCATCCTTGACGCCCACTACATGGCCCGTGCGCTGGAGCTGGCGCGTAAAGGCCTGTA CACCACCCACCCGAACCCGCGCGTAGGCTGCGTGATCGTGCGTGATGGCGAAGTGGTTGGCGAAGGCTGGCACGTTCGCG CCGGCGAGCCCCATGCCGAAGTGCATGCCCTGCGTCAGGCCGGTGAACTTGCCCGAGGTGCTTGTGCCTATGTCACCCTG GAACCATGCAGCCACCATGGCCGTACGCCGCCGTGTGCCGAAGCGCTGGTCAAGGCCGGTGTGGCGCGTGTAGTCGCAGC CATGCAGGACCCTAACCCGCAAGTGGCGGGACAGGGCCTGCGGCGCCTGGCCGAAGCCGGAATCGAAGTGGCCAGCGGGG TGCTCGAAGCCGAGGCCCGCGCCCTCAACCCAGGCTTCCTCAAGCGTATGGAGCACGGCCTGCCGTTCGTTCGCGCCAAG CTGGCCATGAGCCTGGACGGCCGCACCGCCATGGCCAGTGGTGAAAGCCAGTGGATCACCGGCCCGGCCGCCCGCTCAGC CGTGCAGCGCTTGCGCGCCCGCTCCAGCGTGGTGCTGACCAGCGCCGCCAGCGTGCTGGCAGACAACGCACGCATGACCG TGCGTGGTGCCGAGCTGGGCCTGGATGCCGAAACTACTGCCCTGGCTCTTAGCCGCACACCCTTGCGGGTGCTGGTCGAT GGCCGTCTGCGCCTGCCCCTGGCGGCGCCGTTCTTCCAGGCCGGCCCGGCTCTGGTGGTGACTGCTGTCGCAGATGACCC GCGCTATGCCGCTGCCGGCCACGAATTGCTCAGCTTGCCGGGCGACAATGGCCAGGTCGACCTGGGGGCGCTGCTTCACG CTCTGGCCGCCCGCGGCGTCAACGAAATCCTGCTGGAAGCCGGTGCCGGCCTGGTCGGTGCCTTCGCACGGCAAGGCCTG GTCGACGAATACCAGCTGTTCGTCGCTGGCACCTTCCTCGGCTCCCAGGCCCGGCCGCTACTGGACTGGCCGATGGACAA GATGAGCGAAGCACCACGGCTGAAAATTACCGAAATGCGCGCAGTGGGCGATGACTGGCGGGTCACGGCCATCCCCCTGC CAGCGCCCGGCGTATAA Protein sequence : MNMPSQAAILDAHYMARALELARKGLYTTHPNPRVGCVIVRDGEVVGEGWHVRAGEPHAEVHALRQAGELARGACAYVTL EPCSHHGRTPPCAEALVKAGVARVVAAMQDPNPQVAGQGLRRLAEAGIEVASGVLEAEARALNPGFLKRMEHGLPFVRAK LAMSLDGRTAMASGESQWITGPAARSAVQRLRARSSVVLTSAASVLADNARMTVRGAELGLDAETTALALSRTPLRVLVD GRLRLPLAAPFFQAGPALVVTAVADDPRYAAAGHELLSLPGDNGQVDLGALLHALAARGVNEILLEAGAGLVGAFARQGL VDEYQLFVAGTFLGSQARPLLDWPMDKMSEAPRLKITEMRAVGDDWRVTAIPLPAPGV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00289 | YP_008207754.1 | Pyrimidine deaminase | Not tested | AbaR25 | Protein | 4e-59 | 48 |
| BJAB0868_00293 | YP_008211619.1 | Pyrimidine deaminase | Not tested | AbaR26 | Protein | 4e-59 | 48 |
