Gene Information

Name : glnA (PP_5046)
Accession : NP_747147.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : glutamine synthetase, type I
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : -
Position : 5752024 - 5753430 bp
Length : 1407 bp
Strand : +
Note : similar to SP:P06711; identified by sequence similarity

DNA sequence :
ATGTCGAAGTCGGTTCAACTCATCAAAGATCATGACGTCAAGTGGATTGATCTGCGTTTCACGGACACCAAAGGCATTCA
GCACCACGTGACCATGCCGTCGCGTGATGCGCTGGACGAAGACTTCTTCGAAGTCGGCAAGATGTTCGACGGTTCCTCCA
TCGCTGGCTGGAAAGGCATCGAAGCTTCCGACATGATCCTGATGCCGGTCGACGAAACCGCCGTTCTGGACCCGTTCACC
GAAGAACCAACCCTGATCATCACCTGCGACATCGTCGACCCGTCGAGCATGCAGGGCTACGACCGCGACCCACGCGCCAT
CGCCAAGCGTGCTGAAGAGTACCTGAAGAGCACCGGCATCGGTGACACCGTATTCGCCGGTCCAGAGCCTGAGTTCTTCA
TCTTCGACGAAGTGAAGTTCCACTCGGACATCTCCGGTTCGATGTTCAAGATCTTCTCCGAGCAGGGCTCGTGGATGACC
GGCGCTGACGTGGAAGGCGGCAACAAAGGCCACCGTCCAGGCGTGAAAGGCGGCTACTTCCCGGTTCCGCCGTTCGACCA
TGACCACGAAATCCGTACTGCCATGTGCAACGCCCTGGAAGAAATGGGCCAGACCGTTGAAGTTCACCACCACGAAGTGG
CGACTGCCGGCCAGAACGAAATCGGCGTCAAGTTCAACACCCTGGTGAAGAAGGCTGACGAAGTACAGGCGCTGAAATAC
GTCGTGCACAACGTTGCCGACGCTTACGGCCGTACCGCCACCTTCATGCCGAAGCCACTGTACGGCGACAACGGCTCGGG
CATGCACGTGCACATGTCGATCTGGAAAGACGGCAAGAACACCTTCTCGGGTGAAGGCTATGCCGGCCTGTCCGACACCG
CCCTGTACTTCATCGGCGGTATCATCAAGCACGGTAAGGCCCTGAACGGCTTCACCAACCCGTCGACCAACTCGTACAAG
CGTCTGGTCCCAGGCTTCGAAGCCCCGGTAATGCTGGCCTACTCGGCTCGCAACCGTTCCGCCTCGATCCGTATTCCTTA
CGTTGGCAGCCCGAAAGCCCGACGTATCGAAGCACGCTTCCCGGACCCATCGGCCAACCCGTACCTGGCGTTCGCGGCCC
TGCTGATGGCTGGCCTGGACGGCATCCAGAACAAGATCCACCCAGGCGACGCGGCCGACAAGAACCTGTACGACCTGCCG
CCAGAAGAAGCCAAGAACATCCCGCAAGTGTGCGGCAGCCTGAAAGAAGCTCTGGAAGAGCTGGATAAAGGCCGTGCGTT
CCTGACCAAGGGCGGCGTGTTCTCCGACGACTTCATCGATGCCTTCATCGAGCTGAAGAGCGAAGAAGAAATCAAGGTCC
GTACCTTCGTACACCCGCTGGAATACGAGCTGTACTACAGCTGCTGA

Protein sequence :
MSKSVQLIKDHDVKWIDLRFTDTKGIQHHVTMPSRDALDEDFFEVGKMFDGSSIAGWKGIEASDMILMPVDETAVLDPFT
EEPTLIITCDIVDPSSMQGYDRDPRAIAKRAEEYLKSTGIGDTVFAGPEPEFFIFDEVKFHSDISGSMFKIFSEQGSWMT
GADVEGGNKGHRPGVKGGYFPVPPFDHDHEIRTAMCNALEEMGQTVEVHHHEVATAGQNEIGVKFNTLVKKADEVQALKY
VVHNVADAYGRTATFMPKPLYGDNGSGMHVHMSIWKDGKNTFSGEGYAGLSDTALYFIGGIIKHGKALNGFTNPSTNSYK
RLVPGFEAPVMLAYSARNRSASIRIPYVGSPKARRIEARFPDPSANPYLAFAALLMAGLDGIQNKIHPGDAADKNLYDLP
PEEAKNIPQVCGSLKEALEELDKGRAFLTKGGVFSDDFIDAFIELKSEEEIKVRTFVHPLEYELYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 5e-104 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA NP_747147.1 glutamine synthetase, type I VFG1399 Protein 2e-106 52