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Name : lctP (PP_4735) Accession : NP_746843.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : L-lactate transport Function : - COG functional category : C : Energy production and conversion COG ID : COG1620 EC number : - Position : 5383535 - 5385205 bp Length : 1671 bp Strand : + Note : identified by match to PFAM protein family HMM PF03977 DNA sequence : ATGCAAACCTGGCAACAACTCTATAGCCCGCTTGGTAGTCTTGGCCTGTCCGCACTGGCGGCGGTCATCCCTATCGTGTT CTTCTTCCTGGCCCTCGCCGTGTTCCGCCTCAAGGGCCACGTAGCGGGCAGCATCACCCTCGCGCTGTCGATCCTGGTGG CGATCTTCGCCTTCCAGATGCCTGTCGACATGGCCCTCGCCGCCGCGGGTTACGGCTTCCTCTATGGCCTCTGGCCAATT GCCTGGATCATCGTTGCCGCGGTGTTCCTGTACAAACTCACGGTCAAGAGCGGCCAGTTCGAAGTGATCCGCAGCTCGGT GCTGTCGATTACCGACGACCAGCGCCTGCAAGTGCTGTTGATCGGCTTCTGCTTCGGCGCCTTCCTCGAAGGTGCGGCAG GCTTTGGCGCACCGGTGGCCATCACTGCCGCACTGCTGGTGGGCCTGGGCTTCAACCCGCTGTACGCTGCCGGCCTGTGC CTGATCGCCAACACCGCGCCAGTGGCCTTCGGCGCCCTGGGCATCCCGATCATCGTGGCCGGCCAGGTCACCGGTATCGA CGCCTTCCACATCGGCGCCATGACCGGCCGCCAGCTGCCGCTGCTGTCGCTGTTCGTGCCGTTCTGGCTGGTGTTCATGA TGGACGGCCTGCGTGGCGTGAAGGAAACCTGGCCTGCCGCCCTGGTCGCCGGCCTGAGCTTTGCCGTCACCCAGTACTTC ACCTCGAACTTCATCGGCCCGGAACTGCCAGACATCACCTCGGCACTGGCCAGCCTGATCTGCCTTACCCTGTTCCTGAA AGTCTGGCAGCCCAAGCGTGCGTTCAGCGAGGCCAAAGGCAGTGTCGGCGCAGCCGTTGTGCAGCCAAGCGGCAGCCAGC CTAGCCCGTACAGCTTTGGCGAGATCTTCAAGGCCTGGTCGCCGTTCCTGATCCTCACCGTGCTGGTCACCATCTGGACC CTGAAGCCGTTCAAGGCGGCTTTCGCGCCGGGCGGCGCGATGTACAACTTCGTGTTCAACTTCGCCATCCCGCACCTCGA CCAGCTGGTGATCAAGACCGCACCGATCGTTGCCGCGCCGACCGCCATGCCGGCGGTGTTCAAGCTCGACCCGATCTCCG CCACCGGCACCGCGATCTTCCTTTCGGCGCTGATCTCGATGGCGGTGCTGAAGATCAACTTCAAAACTGGTCTTACCACT TTCAAAGAAACCTTCTGGGAACTGCGCTGGCCGATTCTGTCGATCGGCATGGTGTTGGCCTTCGCCTTCGTCACCAACTA CTCGGGCATGTCCTCGACCATGGCCCTGGTGCTGGCCGGTACCGGCGCCGCGTTCCCGTTCTTCTCGCCGTTCCTCGGCT GGCTGGGCGTGTTCCTGACCGGCTCGGACACCTCGTCCAACGCCCTGTTCAGCTCGCTGCAGGCCACCACCGCGCACCAG ATCGGGGTCAACGACACCCTGCTGGTGGCGGCCAACACCAGCGGCGGCGTAACCGGCAAGATGATCTCGCCGCAATCGAT CGCCGTGGCCTGCGCCGCTACCGGCCTGGTCGGCAAGGAATCCGACCTGTTCCGCTTCACCGTCAAGCACAGCCTGTTCT TCGCCACCATCGTCGGCCTGATCACCCTGGTCCAGGCTTACTGGCTGACCGGCATGCTGGTTCATCACTAA Protein sequence : MQTWQQLYSPLGSLGLSALAAVIPIVFFFLALAVFRLKGHVAGSITLALSILVAIFAFQMPVDMALAAAGYGFLYGLWPI AWIIVAAVFLYKLTVKSGQFEVIRSSVLSITDDQRLQVLLIGFCFGAFLEGAAGFGAPVAITAALLVGLGFNPLYAAGLC LIANTAPVAFGALGIPIIVAGQVTGIDAFHIGAMTGRQLPLLSLFVPFWLVFMMDGLRGVKETWPAALVAGLSFAVTQYF TSNFIGPELPDITSALASLICLTLFLKVWQPKRAFSEAKGSVGAAVVQPSGSQPSPYSFGEIFKAWSPFLILTVLVTIWT LKPFKAAFAPGGAMYNFVFNFAIPHLDQLVIKTAPIVAAPTAMPAVFKLDPISATGTAIFLSALISMAVLKINFKTGLTT FKETFWELRWPILSIGMVLAFAFVTNYSGMSSTMALVLAGTGAAFPFFSPFLGWLGVFLTGSDTSSNALFSSLQATTAHQ IGVNDTLLVAANTSGGVTGKMISPQSIAVACAATGLVGKESDLFRFTVKHSLFFATIVGLITLVQAYWLTGMLVHH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| glcA | CAE85240.1 | GlcA protein, putative glycolate permease | Not tested | PAI V 536 | Protein | 6e-163 | 77 |
