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Name : PP_4419 (PP_4419) Accession : NP_746532.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : transposase, OrfA Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2963 EC number : - Position : 5014188 - 5014496 bp Length : 309 bp Strand : + Note : identified by match to PFAM protein family HMM PF04218 DNA sequence : ATGACCAAGCAACGCCGTACCTTTACCCCTGAGTTCAAGCGCGAAGCAGCCTGTCTGGTGCTCGACCAAGGCTACAGTCA TGCCGAAGCAGCCCGCTCGTTCGGCTTGGTCGAGTCGGCCCTGCGCCGCTGGGTTAATCAGCTTCAGCAGGAGCGTGGCG GCATCACGCCGGCCAGCAAAGCGTTGACGCCAGAGCAGCAAAAGATCCAAGAGCTTGAAGCTCGGATAACGCGCCTTGAA CGCGAGAAATCAATACTAAAAAAGGCTACCGCGCTCTTGATGTCGGAAGATCTCGAGCGTATTCGCTGA Protein sequence : MTKQRRTFTPEFKREAACLVLDQGYSHAEAARSFGLVESALRRWVNQLQQERGGITPASKALTPEQQKIQELEARITRLE REKSILKKATALLMSEDLERIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| RS05 | AAP82950.1 | putative transposase | Not tested | PAPI-2 | Protein | 3e-35 | 79 |
| unnamed | CAD42034.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 1e-20 | 56 |
| VPI2_0009c | ACA01826.1 | transposase OrfAB subunit A | Not tested | VPI-2 | Protein | 6e-20 | 54 |
| orfA | AGK06911.1 | IS1359 transposase; OrfA | Not tested | SGI1 | Protein | 6e-20 | 54 |
| unnamed | AGK06948.1 | IS1359 transposase; OrfA | Not tested | SGI1 | Protein | 6e-20 | 54 |
| orfA | AGK06994.1 | IS1359 transposase; OrfA | Not tested | SGI1 | Protein | 6e-20 | 54 |
| orfA | AGK07052.1 | IS1359 transposase; OrfA | Not tested | SGI1 | Protein | 6e-20 | 54 |
| VC1790 | NP_231425.1 | transposase OrfAB subunit A | Not tested | VPI-2 | Protein | 8e-20 | 54 |
| orfA | YP_001217330.1 | transposase OrfAB subunit A | Not tested | VPI-2 | Protein | 8e-20 | 54 |
| orfA | ACX47959.1 | IS1359 transposase; OrfA | Not tested | SGI1 | Protein | 6e-20 | 54 |
| aec66 | AAW51749.1 | Aec66 | Not tested | AGI-3 | Protein | 7e-21 | 52 |
| ECO111_3778 | YP_003236113.1 | putative IS602 transposase OrfA | Not tested | LEE | Protein | 1e-20 | 52 |
| l7045 | CAD33744.1 | - | Not tested | PAI I 536 | Protein | 2e-20 | 51 |
| orfA | CAE85179.1 | OrfA protein, IS911 | Not tested | PAI V 536 | Protein | 2e-20 | 51 |
| insN | YP_002152325.1 | transposase for insertion sequence element IS911 | Not tested | Not named | Protein | 6e-20 | 50 |
| api80 | CAF28554.1 | putative transposase | Not tested | YAPI | Protein | 3e-16 | 50 |
| unnamed | ACU09431.1 | IS911 transposase orfA | Not tested | LEE | Protein | 3e-19 | 50 |
| Z5088 | NP_290240.1 | hypothetical protein | Not tested | LEE | Protein | 3e-19 | 50 |
| ECs4535 | NP_312562.1 | hypothetical protein | Not tested | LEE | Protein | 3e-19 | 50 |
| unnamed | AAC31483.1 | L0004 | Not tested | LEE | Protein | 2e-19 | 50 |
| unnamed | CAD42047.1 | hypothetical protein | Not tested | PAI II 536 | Protein | 8e-12 | 46 |
| unnamed | CAD33780.1 | putative transposase | Not tested | PAI I 536 | Protein | 1e-10 | 44 |
| trp1329A | CAB46577.1 | IS1329 transposase A | Not tested | HPI | Protein | 6e-14 | 42 |
| tnpA | CAB61575.1 | transposase A | Not tested | HPI | Protein | 2e-13 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG1553 | Protein | 4e-21 | 56 |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG1123 | Protein | 2e-20 | 54 |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG1485 | Protein | 8e-21 | 51 |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG0784 | Protein | 8e-20 | 50 |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG1566 | Protein | 3e-12 | 46 |
| PP_4419 | NP_746532.1 | transposase, OrfA | VFG1521 | Protein | 5e-11 | 44 |
