Gene Information

Name : PP_4225 (PP_4225)
Accession : NP_746342.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4797979 - 4798662 bp
Length : 684 bp
Strand : -
Note : similar to GP:8885859, and GP:8885859; identified by sequence similarity

DNA sequence : 
ATGCACGTTCTGCTCTGCGAGGACGACGACCTGATCGCCGCCGGCATCTGCGCCGGTCTCACCGCCCAGGGCTTGACCGT
GGACCGTGTGGGCAACGCCGCCGATGCGCGGGCAATGCTGCAGGCCGCGCAGTTCGACGTGATGATCCTCGACCTCGGCC
TGCCCGACGAAGATGGCCTCAAGCTGCTGCACCGCCTGCGCGAAAAAGGCGAGACCCTGCCGGTACTGGTGCTCACCGCC
CGCGATGCCGTCACCGATCGTGTCGATGGCTTGCAGGCCGGTGCCGACGATTACCTGCTCAAGCCCTTCGATCTGCGCGA
GCTTGCCGCACGCCTGCATACCTTGCTGCGGCGGGTGGCCGGGCGGGCGGTGAACGTGATCGAGCACGGCCCGCTGCGCT
ATGACCCGAGTAGCTGCGAGGCGACCCTGGCCGGCCAGCATGTCGACCTGTCCCGCCGTGAGCAGGCCCTGCTCCAGGCG
CTGCTGCAGAACCCCGGGCGCGTGCTGTCCAGCGAGCAGCTGAAAGACTGCGTGTATGGTTTCAGCGACGAAGTCGAGAG
CAACGCCCTGAATGTGCACATCCACCACCTGCGTCGCAAGCTGGGTAACGGCATTGTCGAGACCGTGCGTGGCCTGGGCT
ACCGGCTGGGCCCGGCGCAGGCACCGCAAGAGGCCGCATCATGA

Protein sequence : 
MHVLLCEDDDLIAAGICAGLTAQGLTVDRVGNAADARAMLQAAQFDVMILDLGLPDEDGLKLLHRLREKGETLPVLVLTA
RDAVTDRVDGLQAGADDYLLKPFDLRELAARLHTLLRRVAGRAVNVIEHGPLRYDPSSCEATLAGQHVDLSRREQALLQA
LLQNPGRVLSSEQLKDCVYGFSDEVESNALNVHIHHLRRKLGNGIVETVRGLGYRLGPAQAPQEAAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-52 56

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_4225 NP_746342.1 winged helix family two component transcriptional regulator BAC0487 Protein 6e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_4225 NP_746342.1 winged helix family two component transcriptional regulator VFG1389 Protein 9e-25 44
PP_4225 NP_746342.1 winged helix family two component transcriptional regulator VFG0473 Protein 6e-37 43