Gene Information

Name : kdpE (PP_4157)
Accession : NP_746275.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 4697339 - 4698034 bp
Length : 696 bp
Strand : -
Note : similar to GP:9947605; identified by sequence similarity

DNA sequence :
ATGAGCCAGTCCGCCACCCTGTTGGTCATCGACGATGAACCGCAGATCCGCAAGTTCCTGCGTATCAGCCTGGCCTCGCA
AGGCTACAAGGTGCTGGAGGCCGCCACCGGTGCCGAAGGGTTGGCCCAGGCGGCACTGGGCAAGCCGGACCTGGTGGTGC
TCGACCTGGGGCTGCCGGACATGGACGGCCAGCAGGTACTGCGTGAGTTGCGCGAATGGAGTGCAGTGCCGGTGATGGTG
TTGTCGGTGCGTGCCAGTGAAGTGCAGAAGGTCGATGCGCTGGATGGTGGTGCCAATGACTATGTGACCAAGCCGTTCGG
TATCCAGGAGTTTCTCGCGCGTGTGCGGGCGTTGCTGCGTCAGGTGCCACAAGCCGGCGGCTCGGAAGTGGCAGCCAGCT
TTGGTCCGCTGACGGTCGATTTTGCCTTCCGCCGGGTGACGCTCGACGGTGTGGAGGTGGCATTGACACGCAAGGAGTAT
GCTTTGCTGGCGATATTGGCCGGGCACCCCGGGCGGGTGATTACCCAGCAGCAGTTGCTCAAGGATATCTGGGGGCCGAC
CCATGCGGAGGATACCCACTACCTGCGCATCGTGGTCGGGCATCTGCGACAGAAGCTGGGCGATGACCCCACGGCGCCGC
GGTTCATCATTACCGAGGCGGGGGTTGGCTACAGGTTGGTGGCGCCGACAGCATAA

Protein sequence :
MSQSATLLVIDDEPQIRKFLRISLASQGYKVLEAATGAEGLAQAALGKPDLVVLDLGLPDMDGQQVLRELREWSAVPVMV
LSVRASEVQKVDALDGGANDYVTKPFGIQEFLARVRALLRQVPQAGGSEVAASFGPLTVDFAFRRVTLDGVEVALTRKEY
ALLAILAGHPGRVITQQQLLKDIWGPTHAEDTHYLRIVVGHLRQKLGDDPTAPRFIITEAGVGYRLVAPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
EF0571 NP_814337.1 DNA-binding response regulator Not tested Not named Protein 2e-29 41
ef0091 AAM75294.1 EF0091 Not tested Not named Protein 1e-29 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
kdpE NP_746275.1 winged helix family two component transcriptional regulator VFG1390 Protein 2e-28 41