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Name : PP_4150 (PP_4150) Accession : NP_746268.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : peptide ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG4172 EC number : - Position : 4689119 - 4690723 bp Length : 1605 bp Strand : + Note : identified by match to TIGR protein family HMM TIGR01727 DNA sequence : ATGAGTGAACAGAACCTGATCGAAGTGCGGGACCTGGCCGTGGAGTTCGTGACCGGGGACCAGGTCAACCGGGTGGTGGA CGGCGTCAGCTTCGATATTCGCAAAGGCGAGACACTGGCCCTGGTGGGCGAAAGTGGCTCGGGCAAATCGGTCACCGCGC ACTCGATCCTGCGCCTGCTGCCCTATCCCCTGGCCCGGCACCCCAGCGGCAGCATCCGCTACGAAGGCAAGGACCTGCTG CAGCAGAGCGAGAAGACCCTGCAGCGCATTCGCGGCAACCGCATTGCGATGATCTTCCAGGAGCCGATGACCTCGCTCAA CCCGCTGCATTGCATCGAAAAGCAGATCAACGAAATCCTCCTGCTGCACAAGGGCCTGACGGGCAAGGAAGCGACTGCGC GCACCCTGGAGTTGCTGGATATGGTCGGCATTCCAGAGCCGCGCAAGCGCCTCAAGGCCCTGCCCCACGAATTGTCGGGC GGCCAGCGCCAGCGGGTAATGATCGCCATGGCGCTGGCCAACGAGCCCGAGCTGCTGATTGCCGACGAGCCGACCACGGC GCTGGATGTGACCGTGCAGCTGAAGATCCTCGAGCTGCTCAAGGAATTGCAGGCGCGTATGGGCATGGCCCTGTTGCTGA TCAGCCATGACCTGAACCTGGTGCGCCGCATCGCTCACCGCGTGTGCGTGATGCAGCGTGGGCAAATTGTCGAGCAAGCC GAATGCGCGACGCTGTTCAGCTCGCCACAGCACCACTACACACAGATGCTGATCAATGCCGAGCCCAGCGGGCTGCCGGC GCACAACCCGGTGGGCGCGCCGTTGCTGGAGGTGGATGACCTCAAGGTCTGGTTCCCGATCAAGAAGGGCTTTCTGCAGC GCACGGTCGACCATGTGAAGGCGGTGGACGGGGTCAACTTCAGCTTGCCCCAGGGCCAGACGCTGGGCATTGTTGGCGAA TCCGGGTCGGGCAAGTCCACATTGGGCCTGGCGATCTTGCGGCTGATTTCCAGCCAGGGCGGCATTCGCTTTCATGGGCA GAACCTCGAAGGGCTGAACCAGAAAGCCGTGCGCCCCCTGCGGCGGGAAATGCAGGTGGTGTTCCAGGACCCGTTTGGCA GCCTGAGCCCGCGCATGTGCGTGGCGGACATTGTCGGTGAAGGGCTGCGCATTCACCGCATTGGCACCGCGCAGGAACAG GAAGCGGCGATTATCGCGGCCCTGGAGGAAGTAGGCCTGGACCCGCGCACCCGCCATCGCTACCCCCATGAGTTTTCCGG CGGGCAGCGCCAGCGCATTGCCATTGCCCGGGCGCTGGTGTTGAAGCCAGCACTGATTCTGCTGGATGAACCCACGTCCG CACTGGACCGCACCGTACAGCGCCAGGTGGTGGAATTGCTGCGTAACCTGCAGCAAAAGTACAACCTGACCTACCTGTTC ATCAGCCATGACCTGGCGGTGGTGAAGGCGTTGAGTCACCAGTTGATGGTGATCAAGCATGGGCATGTGGTGGAGCAAGG GGACGCGCAGGCGATCTTCCATGCGCCGCAGCATCCGTATACCCGACAGTTGCTGGAGGCGGCGTTTTTGGAGGTTGGGG GTTAG Protein sequence : MSEQNLIEVRDLAVEFVTGDQVNRVVDGVSFDIRKGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIRYEGKDLL QQSEKTLQRIRGNRIAMIFQEPMTSLNPLHCIEKQINEILLLHKGLTGKEATARTLELLDMVGIPEPRKRLKALPHELSG GQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILELLKELQARMGMALLLISHDLNLVRRIAHRVCVMQRGQIVEQA ECATLFSSPQHHYTQMLINAEPSGLPAHNPVGAPLLEVDDLKVWFPIKKGFLQRTVDHVKAVDGVNFSLPQGQTLGIVGE SGSGKSTLGLAILRLISSQGGIRFHGQNLEGLNQKAVRPLRREMQVVFQDPFGSLSPRMCVADIVGEGLRIHRIGTAQEQ EAAIIAALEEVGLDPRTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRNLQQKYNLTYLF ISHDLAVVKALSHQLMVIKHGHVVEQGDAQAIFHAPQHPYTRQLLEAAFLEVGG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 1e-75 | 43 |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-94 | 42 |
