Gene Information

Name : PP_4080 (PP_4080)
Accession : NP_746205.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 4608172 - 4609509 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence :
ATGAGTTCACGTAACCCCGTTCTGTGGCCCGAAGGCCTGTTCGTCAAACCACAACATTTCCAACAAGCTGCGCGGGCCAG
TGAAGCGGCCTTGCATCAACGCCTTGGCAGCCTCAACGCGGCCTTCTACGGCTTCAGCGAACTGCAGCTAAGCACCGAAT
ACCTGAGCCTGGGCAAGGTCGCCATCACCAAGGCGCGCGGCATCATGCCCGATGGCACGGTGTTCGATATTCCTGCCGAT
CTGCCGCCGCCGCCGCCCCTGGAAATCGAGGACGACGGTTCGAAAGACAGCGAGATATTCCTGTGCTTGCCGCTGCGTAC
CGAGGGGGGCCGTGAAGTCAGCTGGCCCGACAATGCCGCCAACTTCCGCTACAACGCTCAGGCAGAGGAGATCAAGGATA
CCCACAGCGCCGACGGTGACCTGGTGCAGGTCGACCTGGCCGTGCCCAACCTGCAGCTCAAACGCAAAGCCGATGACAGC
AGTGCCTACACCCGCCTGGCCGTGGCTCGTATCCTGGAGCGGCGCCCTGACGGTAGCCTGCAGTTGGATGAAACGTTCTA
CCCCACCAGCGTTTCGGTGCGGGCAGTGCCGGCCCTTCAGCGGTTTCTTGAAGAAATCACCAACACCCTGCGCGAGCGTG
CGCGCAATCTTGCCGCCCGCATTGGCGCTTCGGGCCAGTCGGGTATCGCCGACATCCGCGACTTCAACCTGCTGCAGGCC
ATGAACCGCTGGTGGCCGTGCTTCAACCACCTGGCCCGGCAAGGACAAACACACCCCGAGCAGTTGTACCTGTCCATGAG
CCAGGCGTGTGGCGAATTCGTCACCTTCACCGACGAGAACCGGCTGCCGCAGGAATACCCGGCCTACCACCACACCGCAC
TGCGTACCTCGTTCAAGCCCCTGGAGGATACGCTCCGTCGAGCCCTGAGCACGGTCCTGCAACCCCGCGCCGTGTCACTG
CCGCTGGAGACCCTGGACTTTGGTGTGATGACGACCACGCTGGAAGACCGGCGCCTGATTGACGAAGCCGATTTCATCAT
CGCCGTGCGCGCCGACCTGCCGCCGCAGACGTTGCGCCAGATGTTCATCCAGAAAGCCAAGGTCACCTCACTCGAATCCT
TGAATGACCTGGTGCCTTTGCAACTGCCGGGCATCCCGCTGCTGCCCCTGCCGGTTGCACCACGCGACCTGCCCTTCCAT
GCGGGCTTCAGCTACTTCGAACTGGACCGCCGTGACCCCGCCTGGGCCTGCATGAAGACGGCCAACGGCTTCGGCTTCCA
CGTTGCAGGTGAGTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGGGTGAATGA

Protein sequence :
MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLGSLNAAFYGFSELQLSTEYLSLGKVAITKARGIMPDGTVFDIPAD
LPPPPPLEIEDDGSKDSEIFLCLPLRTEGGREVSWPDNAANFRYNAQAEEIKDTHSADGDLVQVDLAVPNLQLKRKADDS
SAYTRLAVARILERRPDGSLQLDETFYPTSVSVRAVPALQRFLEEITNTLRERARNLAARIGASGQSGIADIRDFNLLQA
MNRWWPCFNHLARQGQTHPEQLYLSMSQACGEFVTFTDENRLPQEYPAYHHTALRTSFKPLEDTLRRALSTVLQPRAVSL
PLETLDFGVMTTTLEDRRLIDEADFIIAVRADLPPQTLRQMFIQKAKVTSLESLNDLVPLQLPGIPLLPLPVAPRDLPFH
AGFSYFELDRRDPAWACMKTANGFGFHVAGEFPGLELQFWAIRGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-66 41
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 3e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_4080 NP_746205.1 hypothetical protein VFG2082 Protein 9e-100 49
PP_4080 NP_746205.1 hypothetical protein VFG2065 Protein 1e-77 45