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Name : PP_3940 (PP_3940) Accession : NP_746070.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : major facilitator family transporter Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG2271 EC number : - Position : 4442667 - 4443980 bp Length : 1314 bp Strand : - Note : identified by match to TIGR protein family HMM TIGR00893 DNA sequence : ATGCCAATTGCGAATGCAACCACGGTCCACAGTGACATCGACCATGGCACGAAAGCGCTGTACAGCAAGATCACCTGGAG GCTCATCCCCTTCTTGTGTTTCTGCTACCTCGCAGCTTATCTGGACCGCATCAATGTCGGCTTCGCCAAGCTGCAGATGC TCGAAGACCTGCAGTTCAGCACAGCGGCCTATGGCCTGGGTGCAGGGCTGTTCTTCGTCGGCTACATCATCTTCGAAGTG CCGAGCAACCTGATCCTGCAGCGCGTTGGCGCCAAGCTGTGGATCGCCCGCATCATGATCACCTGGGGCCTGCTGTCGGC CTGCACCATGTTCGTCACCAGCACCACCCAGTTCTATATCCTGCGTTTCCTGCTGGGGGCGGCCGAGGCCGGCTTCCTGC CAGGCGTGCTGTACTACCTGACCATGTGGTACCCCACCTATCGCCGCGGGCGCATCATTGCCCTGTTCATGATCGGGCTG CCGTTGTCGAGCGTGATTGGCGGGCCGATTTCTGGCTGGATCATGGGGCATTTCGACCAGGTTCAAGGTTTGCATGGGTG GCAGTGGCTGTTCCTGCTGGAGGCGATCCCCAGCGTTTTGCTCGGCATCCTCACGTTCTGGGCATTGCCTAACCATTTCC AGCAGGCCAAGTGGCTGTCGGCTGACGACAAGGCACAACTGGCGGCAGACCTGGCCGCCGACGATGCCGAGGGCAAGGAC AGCAAACACAGCTTCCGCGATGGCTTCTTCAACCTTAAGGTGTGGATGCTCGGTGGTATCGACTTTTCGATCCTGCTCAG CGCCTATGCGATGGGCTTCTGGATGCCGACCTTCATCCGCGATGCGGGCGTCAGCGACACCTTCCATATCGGCCTGCTCA CGGCCATTCCAAGCCTGGCCGCGCTGGCCGGCATGCTCATGATCGGGGCCAGCTCCGACCGCCACCGCGAGCGCCGCTGG CACATCATCGTGCCGTTTATCATTGGTGCAATCGCCATGGCCAGCAGCACCTTGTTCAGCCAGAACCTGGTGATGACCGT GGTGCTGTTCGCCATTGCCTCGGCGGCGATCATCGGCGCGGTGCCGGTGTTCTTCAGCCTGCCGGCGACTTTCCTCAAAG GCACCGCAGCCGCCACCGGCTTTGCCCTGGCCTGTTCGGTAGCCAACATCGCCGGCCTGGTGAGCAACTCACTGATGGGC GTGGTCACCGACCTCACCGGCACCTCGCACGCTGCGCTGTGGGTGTTTGCCGGCTGCCTGATCCTCAGCTGCTTCCTGGT CATCGCCTTGCCGGCCAAGCTGGTCAACCGCTAG Protein sequence : MPIANATTVHSDIDHGTKALYSKITWRLIPFLCFCYLAAYLDRINVGFAKLQMLEDLQFSTAAYGLGAGLFFVGYIIFEV PSNLILQRVGAKLWIARIMITWGLLSACTMFVTSTTQFYILRFLLGAAEAGFLPGVLYYLTMWYPTYRRGRIIALFMIGL PLSSVIGGPISGWIMGHFDQVQGLHGWQWLFLLEAIPSVLLGILTFWALPNHFQQAKWLSADDKAQLAADLAADDAEGKD SKHSFRDGFFNLKVWMLGGIDFSILLSAYAMGFWMPTFIRDAGVSDTFHIGLLTAIPSLAALAGMLMIGASSDRHRERRW HIIVPFIIGAIAMASSTLFSQNLVMTVVLFAIASAAIIGAVPVFFSLPATFLKGTAAATGFALACSVANIAGLVSNSLMG VVTDLTGTSHAALWVFAGCLILSCFLVIALPAKLVNR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96228.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-85 | 47 |
| unnamed | AAT96176.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 2e-85 | 47 |
| unnamed | AAT96116.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 1e-87 | 47 |
| unnamed | AAT96055.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-85 | 47 |
| unnamed | AAT96099.1 | major facilitator family transporter | Not tested | T-PAI | Protein | 3e-85 | 47 |
