|
Name : PP_3547 (PP_3547) Accession : NP_745684.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : short chain dehydrogenase/reductase oxidoreductase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG1028 EC number : - Position : 4021361 - 4022107 bp Length : 747 bp Strand : - Note : identified by match to TIGR protein family HMM TIGR01500 DNA sequence : ATGGAGAACGTCATTGTCATCACCGGCGGCAGCCGCGGTATCGGCGCCGCCACTGCGCTGCTGGCCGCCCGCCAGGGCTA CCGCATCTGCATCAATTATCACGCCGATGACCAGGCCGCCGAAGCCATCCTCAGCCAGGTCCGCGCCCTGGGCGCCGAAG CCATCGCGGTGCGCGCCGACGTCAGCGTCGAAGATGAAATCATCCAGCTGTTCCTGCGCGTCGACGACGAGCTCGGCCCC GTCACCGCACTGGTCAACAACGCCGGCACCATCGGCCAGCAGAGCAGGGTCGAGGACATGTCCGAGTTCCGGCTACTGAA CGTCATGAAGACCAACGTCGTCGGCCCCATGCTCTGCGCCAAGCACGCCCTGCTGCGCATGGCGCGCCGGCATGGCGGGC AAGGCGGGGCCATCGTCAACGTATCATCGGTAGCCGCACGCCTGGGTTCGCCCAACGAATATGTCGACTATGCCGCCTCC AAGGGCGCGCTCGACACCTTCACCATCGGCCTGGCCAAAGAAGTGGCAGGCGAGGGCGTGCGCGTCAATGGCGTACGACC AGGCTATATCCATACCGGTTTCCATGCGCTTTCGGGTGACCCGGACCGCGTCAGCAAGCTCGAACCTGGCTTGCCCATGG GCCGAGGGGGGCGTCCCGAGGAAGTGGCCGAGGCCATCCTCTGGTTGCTTTCGGACAAAGCCTCCTATGCCACCGGCAGC CTCATCGACCTGGGCGGCGGGCGCTGA Protein sequence : MENVIVITGGSRGIGAATALLAARQGYRICINYHADDQAAEAILSQVRALGAEAIAVRADVSVEDEIIQLFLRVDDELGP VTALVNNAGTIGQQSRVEDMSEFRLLNVMKTNVVGPMLCAKHALLRMARRHGGQGGAIVNVSSVAARLGSPNEYVDYAAS KGALDTFTIGLAKEVAGEGVRVNGVRPGYIHTGFHALSGDPDRVSKLEPGLPMGRGGRPEEVAEAILWLLSDKASYATGS LIDLGGGR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VSAL_I1482 | YP_002262921.1 | glucose 1-dehydrogenase | Not tested | Not named | Protein | 8e-62 | 57 |
| orf29 | AAO17195.1 | Orf29 | Not tested | tcd island | Protein | 2e-65 | 55 |
