Gene Information

Name : xcpT-2 (PP_3423)
Accession : NP_745561.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 3875006 - 3875515 bp
Length : 510 bp
Strand : +
Note : similar to GP:4680731, and GP:4680731; identified by sequence similarity

DNA sequence : 
ATGGCGCAAGGCCCCGAGGCAGACGTGCACGGCTGTTGCATGGTGCATGTCAACGCTTGTCCCCATGCAGTGGAGGGTTT
CACCATGCAGCGCAGAACCAACCCGCAACGTGGCTTCACTCTGCTTGAACTCCTGGTGGTCCTGGTGGTACTCGGCCTGC
TGGCCGGCATCGTCGCGCCCAAGTACTTCAGTCAGCTCGGCCGCTCCGAGGCCAAGGTAGCGCGGGCGCAGATCGAGGGG
CTGAGCAAGGCCCTGGACTTGTATCGCCTGGAGGTCGGCCACTACCCCAACAGCGAACAAGGCTTGCAGGCGCTGGTGGT
CGCCCCCAGTGGCGAAGCTCGCTGGACCGGCCCGTACCTGCAGAAGGCCGTGCCGCAAGACCCGTGGGGCCGCCCTTACA
TCTACCGGCAACCCGGCGAGAACGGCGGTGAGTACGACCTGCTGTCGATGGGCAAGGACGGCCAGCCGGGTGGCGATGGC
GAAAATGCCGAAGTTACTAGTTGGCAGTAA

Protein sequence : 
MAQGPEADVHGCCMVHVNACPHAVEGFTMQRRTNPQRGFTLLELLVVLVVLGLLAGIVAPKYFSQLGRSEAKVARAQIEG
LSKALDLYRLEVGHYPNSEQGLQALVVAPSGEARWTGPYLQKAVPQDPWGRPYIYRQPGENGGEYDLLSMGKDGQPGGDG
ENAEVTSWQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 1e-19 42
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-19 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT-2 NP_745561.1 general secretion pathway protein G VFG1871 Protein 9e-19 44
xcpT-2 NP_745561.1 general secretion pathway protein G VFG0180 Protein 2e-19 43
xcpT-2 NP_745561.1 general secretion pathway protein G VFG2050 Protein 4e-20 42