|
Name : PP_3220 (PP_3220) Accession : NP_745363.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : ABC transporter ATP-binding protein Function : - COG functional category : R : General function prediction only COG ID : COG1123 EC number : - Position : 3654770 - 3656389 bp Length : 1620 bp Strand : - Note : identified by match to TIGR protein family HMM TIGR01727 DNA sequence : ATGAGCCAGTCACCCCTGATCGAGGTCCGCGACCTAAGCGTCAGCTACAGCTTCGCCGGGCAACGCAGCCAGGCCCTGCG CCAGCTGTCGTTCAGCCTGGTCCAGGGCGAGACCCTGGCGGTGGTGGGCGAGTCAGGCTCGGGCAAATCGACCCTGGCCA ACGCCCTGCTTGGTCTGTTGCCGGGCAATGCACGCATCGACCAAGGCCAGTTATGGGTCGATGGTGTCGATATGGCGCAA GCCAGCGAACGCGCCAGGCGCCAGTTGCGCGGGCGCACCATCGGCCTGGTGCCGCAAGACCCAATGGTCAGCCTCAACCC CACCCAACGGATCGGCCAGCAAATCGCCGAGGCGCTGCAGCTGGCGCGTGGACGACGCTATCCAGGCCAAGAGGCCAAGG TGCTGGCGCTGCTGGACCAGGTCGGCCTCGACGAGCCGGCGCTGCGTGCGCGGCAGTACCCCCATGAGCTGTCCGGCGGC ATGCGCCAGCGGGTGCTGATTGCCATCGCCCTGGCCGGCGAGCCACGGTTGATCATCGCCGACGAGCCCACCAGTGCGCT GGACGTGACTGTGCAGCGGCGTATTCTCGATCACCTGCAACTGCTGGTCGCCGAGCGCGGCATCTCGCTGCTGATCATCA CCCATGATCTGGGCATGGCCTGTGACCGCGCCGACCGCCTGCTGGTGATGAAGCAGGGTGAGCAGGTCGAACACGGCTCG CCCCGGCAGATCCTCTGGGGCGCCCGGCAACCCTACACCCGCGCCCTGCTCGATGCCGCGCCGGCCTTCGTGCCACGGCG CAGGCCAGCCGCACCGCGGGGCCAGACGCCACTGCTGCGCCTGAGCCATGTCGGCAAACGGTTCGAGCTGCCCGGCAAAA ACGAGCATTACACTGCCCTGCACGACCTGAGCCTTGAACTGCATGCCGGGCAGACCCTGGCGATTGTCGGCGAATCCGGC TCGGGCAAGAGCACCGCCCTGCGCATCGCCCTGGGCCTGGAGAAGCCCAGTCAAGGGCAGGTGGTGTTCGCCGGCGAGGA CGTCACCGGTTACACCTGGAGCCAGTTCCGCCCCTTGCGCCGGCGTATCCAGCTGGTGCAGCAAAACCCGTTCGCCGCGC TCGACCCGCGCTTCACCGTGTTCGACAGCGTCGTCGAGCCGCTGGTCTCTTTCGGCCTGCTCCGGGGCGAGGCACTAGAG CGCAAGGCCCGCGAGCTGATCACACGGGTGCAATTGCCAGTGCAGTTCCTCGATCGCCTGCCCAGGGAATTGTCAGGTGG CCAGCGCCAACGCGTGGCGATTGCACGGGCGTTGGCACTGGAGCCAGAGGTGCTGCTGCTCGATGAGCCAGTCAGTGCAC TGGACGTGTCTGTGCAGGCGCAGATCCTCGCCCTGCTGGACGAATTGCAGCGCGAGCTCGGCATGGCCTATGTGCTGGTC TCCCATGACCTGGCGGTGGTGGCGAGCATGGCAGACCAGGTGCTGGTGCTACGGCGCGGGCAGGTGGTCGAGCAAGGGCC GGCGCTGCAGGTGCTCAGCAAGTCGGCCAGCGCCTACACACGGGCGCTGATCGACGCGATACCAGGGCATTCACGCAGCA TGTTGCCCGTGGCGATTTAA Protein sequence : MSQSPLIEVRDLSVSYSFAGQRSQALRQLSFSLVQGETLAVVGESGSGKSTLANALLGLLPGNARIDQGQLWVDGVDMAQ ASERARRQLRGRTIGLVPQDPMVSLNPTQRIGQQIAEALQLARGRRYPGQEAKVLALLDQVGLDEPALRARQYPHELSGG MRQRVLIAIALAGEPRLIIADEPTSALDVTVQRRILDHLQLLVAERGISLLIITHDLGMACDRADRLLVMKQGEQVEHGS PRQILWGARQPYTRALLDAAPAFVPRRRPAAPRGQTPLLRLSHVGKRFELPGKNEHYTALHDLSLELHAGQTLAIVGESG SGKSTALRIALGLEKPSQGQVVFAGEDVTGYTWSQFRPLRRRIQLVQQNPFAALDPRFTVFDSVVEPLVSFGLLRGEALE RKARELITRVQLPVQFLDRLPRELSGGQRQRVAIARALALEPEVLLLDEPVSALDVSVQAQILALLDELQRELGMAYVLV SHDLAVVASMADQVLVLRRGQVVEQGPALQVLSKSASAYTRALIDAIPGHSRSMLPVAI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-96 | 45 |
