Gene Information

Name : gpW (PP_3053)
Accession : NP_745197.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Unknown
Product : pyocin R2_PP, baseplate protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3628
EC number : -
Position : 3434763 - 3435089 bp
Length : 327 bp
Strand : +
Note : See PMID: 11069649; PRF12

DNA sequence :
ATGATCGGCCTGGATCGCCGCAACGGCGAAGCTATCTCGGGCCTTGACCACTTGCGCCAATCCATCGAAGACATCTTGAC
CACGCCACTCGGCAGTCGCCGCATGCGGCCGGAATACGGCAGCAAGCTGCGGCGTTACGTCGACATGCCGGTCAACGAGG
GGTGGAAAAGCGCGGTACAGGCCGAGGTGGCCCGTGCCTTGGGCCGCTGGGAGCCGCGCTTGCGGCTGGAGCGGGTGGTG
GTCACCTCGGTGCTTGACGGGCAGATCGGCATGACGTTGACCGGCGAGTACCTGGGCAGCGCTGCCGTCATGGAGGTAAC
CGCATGA

Protein sequence :
MIGLDRRNGEAISGLDHLRQSIEDILTTPLGSRRMRPEYGSKLRRYVDMPVNEGWKSAVQAEVARALGRWEPRLRLERVV
VTSVLDGQIGMTLTGEYLGSAAVMEVTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4614 NP_458696.1 phage baseplate assembly protein Not tested SPI-7 Protein 7e-15 46
t4308 NP_807904.1 phage baseplate assembly protein Not tested SPI-7 Protein 7e-15 46
unnamed ABR13479.1 predicted baseplate Not tested PAGI-6 Protein 7e-14 45