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Name : czrR-1 (PP_0029) Accession : NP_742199.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : DNA-binding response regulator CzrR Function : - COG functional category : T : Signal transduction mechanisms COG ID : COG0745 EC number : - Position : 32893 - 33567 bp Length : 675 bp Strand : + Note : identified by match to TIGR protein family HMM TIGR01387 DNA sequence : ATGCGCGTTCTAGTTGTGGAAGACGAAATTAAAACTGCCGAATATCTTCAGCAGGGCCTATCCGAAAGCGGGTATGTCGT AGATATCGTGCACAACGGTGTAGATGCTCTGCACTTGTTCAACACTAATGTCTATTCGTTGGTCCTCCTGGACGTGAACC TCCCGGGTATCGACGGCTGGGACCTGCTGGAAACCATCCGTAAGACCAGCCGGGTCCGCATCATCATGCTGACCGCCCGC GGACGCATCAATGACAAGCTCAAGGGCTTGGACGGCGGCGCGGATGACTACCTTGTGAAGCCATTCGAATTCCCTGAGCT GCTTGCTCGCATCCGTTCGCTGCAACGCCGTGGTGATGAGTTAGTCGAGAAGAGCTCGCTGAAAATTGCCGATCTGGAAC TCGACTCCGTCCGCCATCGCGTCTTCCGCGGTGGCACACGCATCGATCTCACCACCAAGGAATTTGCGCTTCTGCACCTG CTCATGAGCCGAACGGGCGAAGCGCTGACTCGCTCTCAGATCATCTCGTTGGTCTGGGATATGAATTTCGATTGCGACAC CAATGTCATCGATGTAGCCATCCGGCGCTTGCGCTCGAAGATCGATGACCCGTTTGAAACCAAGCTCATTCACACGCTTC GTGGCGTTGGGTACGTTTTTGAGGAACGCGCATGA Protein sequence : MRVLVVEDEIKTAEYLQQGLSESGYVVDIVHNGVDALHLFNTNVYSLVLLDVNLPGIDGWDLLETIRKTSRVRIIMLTAR GRINDKLKGLDGGADDYLVKPFEFPELLARIRSLQRRGDELVEKSSLKIADLELDSVRHRVFRGGTRIDLTTKEFALLHL LMSRTGEALTRSQIISLVWDMNFDCDTNVIDVAIRRLRSKIDDPFETKLIHTLRGVGYVFEERA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| copR | NP_460069.2 | transcriptional regulatory protein YedW | Not tested | SPI-5 | Protein | 9e-49 | 51 |
| copR | AAC33719.1 | regulatory protein CopR | Not tested | SPI-5 | Protein | 4e-48 | 51 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0125 | Protein | 1e-57 | 60 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0197 | Protein | 3e-55 | 58 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0083 | Protein | 3e-54 | 57 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0638 | Protein | 6e-50 | 57 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0308 | Protein | 2e-51 | 56 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0111 | Protein | 2e-54 | 55 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | BAC0347 | Protein | 5e-50 | 52 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_007793.3914065.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_002758.1121390.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_010079.5776364.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_002952.2859858.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_007622.3794948.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_003923.1003417.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_013450.8614146.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | NC_002951.3238224.p0 | Protein | 3e-30 | 41 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | AE015929.1.gene1106. | Protein | 2e-25 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | VFG0596 | Protein | 3e-49 | 51 |
| czrR-1 | NP_742199.1 | DNA-binding response regulator CzrR | VFG1390 | Protein | 1e-34 | 43 |
