|
Name : PP_2808 (PP_2808) Accession : NP_744952.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : oxidoreductase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0665 EC number : - Position : 3200670 - 3202037 bp Length : 1368 bp Strand : + Note : identified by match to PFAM protein family HMM PF01494 DNA sequence : ATGAATGCCTTGAACAATGCGGCCGATGGTGACTCAGCACCGTTGAAGTTTCGCGGTCTGGGGGGATGGGTAGAGCGACC GGCTGATCTGCAGCCGGCCCTCGAAGGTGACGCGCAGGCCGATGTGATCGTGATCGGCGCCGGCTTTGCCGGGCTGTCGA CCGCGCTGGAACTCAAGGCGCTCGGGGCGGATGTGATCGTGCTGGAACAGGAATTCGCCGGCTTCGGTGCCAGTGGCCGC AATGCCGGCTACCTGCTGGGCAGCATGGGCATCGAGTACGATATGTTCGTCAAACGGGTGGGCGTGGAGCAGGCCACGCA GTTCGTCAGGTTCTATGACGAGGCGGTGCCCTACGTGGAAGGTCGATTCAAAACCTTGGGTATCGACTGTGACTACAACC CTTCGGGCGTGCTCCGGGCAGGTGTTCATCCCAGTCAGGAGAAGCGCTTGCGGGAAAACATGGCGCTGGGTCAGACACTG GGGGCGACGAGCCGCTTCGTCGAAGGTGCCGAGATGCGTGCGCGGGGCATCCCCCCTGCGTTTCTGTTCGCCGCCGAGCA ATGTGGCGGCACCTTGAATCCAGGGAAGTACATCGGCGGCCTCCGGCGCGCGGCCATCGAGGCGGGGGTGAAGCTCTACG AACGCACGCCGTTGCTGAGCTTCAGCGAAGGGCCGGTCATTACCTGCAAGACTGCCCATGGCCGTGCAACCGCCCCGGTG ATGGTGCTGGCAACCAACGCCTATACCCCGCAGCTGGGGGTGTTGCGCAACAAGGTCGCGGCGATTCGGGTGTCGGCAAT CGAAACCCAAACGCTGTCGACGCAGCAGTTGGCTGCCCTCGGCTGGCAAGGGCGGGAAGGGATCATCACGCCGCACTACA CCATGGAGAGCCACCGCCTGACGGCACACGGCACGATGGTGTTGACCGTCAAGAAGCTAGGTTATGCCTACGGTTCGAAG ACGCCCAATGTCCCGGACCAGGGCGCCTATGCGGCATTGGCGCAGGTACTGCGCGAGCGCTATCCGGCATTGCAAGGCCT TGGCGTCAAGCACTGCTGGAGTGGTTACGTCAGTGGCGCCTACGACTTTCTGCCGGTGATCGGTGCCATGGGCGCGAAAC AGAACATTTACTACGCCACCGGCTGCTCGGGCCACGGGCTGGGCACGCAATCGTTGATCGGCAAGCTGTTTGCCCAGCAA ATCAACGGCCAGGCGCCTGAGCTGCTGGCAGCACTGCAACACAAAACGCCGTCCTTGCTGCCTGAACCCTTGCAATGGTG CGCCGTACACGCTGCCTTTGCGGCGGCCAAGTTGCTGGATGACTGGACCGATAGAAAAGTGCGTAAAGACAAGGCCAGGA AGGGCTGA Protein sequence : MNALNNAADGDSAPLKFRGLGGWVERPADLQPALEGDAQADVIVIGAGFAGLSTALELKALGADVIVLEQEFAGFGASGR NAGYLLGSMGIEYDMFVKRVGVEQATQFVRFYDEAVPYVEGRFKTLGIDCDYNPSGVLRAGVHPSQEKRLRENMALGQTL GATSRFVEGAEMRARGIPPAFLFAAEQCGGTLNPGKYIGGLRRAAIEAGVKLYERTPLLSFSEGPVITCKTAHGRATAPV MVLATNAYTPQLGVLRNKVAAIRVSAIETQTLSTQQLAALGWQGREGIITPHYTMESHRLTAHGTMVLTVKKLGYAYGSK TPNVPDQGAYAALAQVLRERYPALQGLGVKHCWSGYVSGAYDFLPVIGAMGAKQNIYYATGCSGHGLGTQSLIGKLFAQQ INGQAPELLAALQHKTPSLLPEPLQWCAVHAAFAAAKLLDDWTDRKVRKDKARKG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01513.1 | phytoene dehydrogenase protein | Not tested | PAGI-1 | Protein | 6e-176 | 77 |
