|
Name : PP_2790 (PP_2790) Accession : NP_744934.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : Fis family transcriptional regulator Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 3178718 - 3180670 bp Length : 1953 bp Strand : - Note : identified by match to PFAM protein family HMM PF02954 DNA sequence : ATGGATGCTCTTGCCTCCCAGGTCGTCGTGCTGATCAGCCACTTGCAGCGCCCCCAACAACGGAGCCGGCTCGCCCATGT GGTGGCCGGGCTCACGACGGACTACCCAGATACTCGTATCGAAGTCCTCGACACCTCGGTGGCTGAAGCACTACAGACCG CCCGAGAATTGGAGCAGGCAGGCAAGGTCGATGTGTTCGTCTGCGCCGGGGCGACCGCCGCCTACCTGCGCAAACACCTG ACACGCCCGGTACTGGCGATGCGCGTGGGCAGTGGCGACCTGCTACGGGCATTGGGGCAGGCCCGCGAACGCTCCTCCCA AGTGGCCGTGCTCAGCTACAACCATGTCAACCACGACCTGCAAGCCATGGCCGCGCTCTTCACCGTCCAGGTTCACCAGG CCGCCTACACCTCCCTGGAAGAGGCCCGCCAGGCCGTCGAACAGGCGGCCCAGCTAGGCTGTCGCAGCATCATCGGCTCG TCGACGGTGGTGGAGCTGGCGGAGCAGGCAGGGCTGCATGGCGTGCTGTCGCTGAGCGAAGACACCGCGCGCAAAGCGCT GGAGGAAGCCCTGGGCATTCTCGACACTCAACGCGTCGAGATCGCCAAACGGCGGCATCTGAATGCCGTGCTGCGGCATA TCCCCGCCGGCGTAGCAGCGGTCGACAACCAAGGCGTGGTGCAGTCGCTCAACCCTGCCCTTGCGCAGCTGCTGGACCTG CCGGTTAGCGCAGCGCTGGGCCGGCCGCTGCAGCAGCTGTGCCCGGAACTGGACCTGCAGCAGGCGCTGCAGGAAGGCAC GGGTGAAGAAAACCGCGTGATGCGGCTCGGCTCGCACGCCGTGGTGAGCAATTTACTGCCTATCCTGGAGAACGGCGAAC GTACCGGCCTGGTCCTGACCTGCCAGGACATCACTGTTGTGCAACGTGCCGACCAACGCATCCGATCCACCCGCCGCCCT GGTGCGTTCACTGCCCGTTACCGGCTCGACCAGCTCAACGGCAACAGCAAGGCCAACCGCGAGATGCTGCAGTTGGCCAA GCGTTTTGCCACCAGCCATTCGACCATCCTGATTACCGGTGAAAGCGGCACCGGCAAGGAACTGCTCGCCCAGGGAATCC ATAACGAAAGCCCGCGCCGGCAAGGCCCCTTCGTCGCCATCAACTGCGCGGCGTTTCCCGAGTCGTTGCTGGAAAGTGAA TTGTTCGGCTACGAGGAAGGCGCCTTCAGCGGCTCGCGCAAAGGTGGCAAGCCAGGCCTGTTCGAAGCAGCACACCGCGG CACGCTGTTCCTCGACGAGATCGGCGACATGCCGGTGTCGCTGCAAACACGCCTGCTGCGCGTGCTGCAAGAGCGCGAAG TCCTGCGCCTGGGCAGCACCGAACCGATTGCCATCGACGTGCGCATCATTGCCGCCACCCACAAGGACCTGCGCAGCGCC ATGGACGATGGCGATTTCCGTACCGACCTGTATTTCCGGCTCAACATCCTGCGTCTGCAGACCACCCCGCTGCGAGAGCG CCCTGAGGACATTGCCCTGATCTGCCGGGGCATCAGCCAGCGCCTGCTCGTTCAGGGGCAACCACCGGGAGCTGCAGACA TCCCCGCCGCGCTGCTGCCGTACCTTGAACGCTATGCCTGGCCGGGCAATGTCCGGGAACTGGAGAATGTGATCGAGCGC GCGATGCTCTCGGCACGCGAACTGCTTGAGGAACACCGCGTGAACGAGCAGTACCTAGCACGCGTGCTACCTGAACTGTG CGAAGGCCCTCCCCCTTCACCCGCCCGGAAAAAGTCGTCAGGCGAAACGGACCTGCACACCATCGGCAAGGTCGCGCAAC TGCGCCATGTAAAGGAAACGTTGGAAAGCTGCCGCGGCAACCTCGACGAAGCCGCCCGCCGTCTCGGCATCAGCCGCACA ACCTTGTGGCGGCGCTTGCGATCTGCCAATTGA Protein sequence : MDALASQVVVLISHLQRPQQRSRLAHVVAGLTTDYPDTRIEVLDTSVAEALQTARELEQAGKVDVFVCAGATAAYLRKHL TRPVLAMRVGSGDLLRALGQARERSSQVAVLSYNHVNHDLQAMAALFTVQVHQAAYTSLEEARQAVEQAAQLGCRSIIGS STVVELAEQAGLHGVLSLSEDTARKALEEALGILDTQRVEIAKRRHLNAVLRHIPAGVAAVDNQGVVQSLNPALAQLLDL PVSAALGRPLQQLCPELDLQQALQEGTGEENRVMRLGSHAVVSNLLPILENGERTGLVLTCQDITVVQRADQRIRSTRRP GAFTARYRLDQLNGNSKANREMLQLAKRFATSHSTILITGESGTGKELLAQGIHNESPRRQGPFVAINCAAFPESLLESE LFGYEEGAFSGSRKGGKPGLFEAAHRGTLFLDEIGDMPVSLQTRLLRVLQEREVLRLGSTEPIAIDVRIIAATHKDLRSA MDDGDFRTDLYFRLNILRLQTTPLRERPEDIALICRGISQRLLVQGQPPGAADIPAALLPYLERYAWPGNVRELENVIER AMLSARELLEEHRVNEQYLARVLPELCEGPPPSPARKKSSGETDLHTIGKVAQLRHVKETLESCRGNLDEAARRLGISRT TLWRRLRSAN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01495.1 | propionate catabolism operon regulator prpR | Not tested | PAGI-1 | Protein | 0.0 | 86 |
