Gene Information

Name : arsB-2 (PP_2717)
Accession : NP_744861.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Resistance
Product : arsenite efflux transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1055
EC number : -
Position : 3106061 - 3107344 bp
Length : 1284 bp
Strand : -
Note : similar to GP:3095051; identified by sequence similarity

DNA sequence :
ATGCTGCCCGCCATTGCTGTCTTCGTGTTCACCCTCATACTGGTCATCTGGCAGCCCAAGGGGCTCGGTGTTGGCTGGAG
CGCCGCGCTAGGCGCCATCATCGCCCTGGCTACAGGCGTAGTTTCCCTGCATGACATCCCTGCCGTATGGGCCATTGTCT
GGAACGCCACCGCCACGTTCATCGCGGTCATCATCATCAGCTTGCTGCTGGATGAGGCGGGTTTCTTCGAATGGGCCGCA
TTGCATGTGGCACGCTGGGCAAACGGCAGCGGCCACCGCCTGTTCGCCTTCTGCGTACTGCTCGGCGCCGCTGTATCGGC
GCTGTTCGCCAACGACGGTGCGGCGCTGATCCTCACCCCCATCGTCATGTCGATGCTGCTCGCGCTGCGCTTCTCACCTG
CAGCGACACTGGCCTTTGTCATGGCAGCAGGCTTCATTGCCGACACGGCAAGCCTGCCGCTGGTGGTCTCCAACCTGGTC
AACATCGTCTCGGCCGACTACTTCGGCCTGGGCTTCGCCGAATACGCATCGGTGATGGTGCCGGTGAACATCGCCAGCGT
GGCGGCCACCCTGCTGGTGCTATTCCTGTACTTCCGTCGTGATATCCCCAAGCAGTACGCGCTCGATGCGCTGAAGGCGC
CGAGCGAGGCAATTCATGACCACGCCACCTTCAAAGTCGGTGGGTGGGTGCTGCTGGTGCTGCTTGCAGGCCTGTTCGCA
CTGGAACCTCTGGGCATCCCGATCAGTGCGGTGGCCGCCGTCTGCGCCGCAATCCTCTTTGCCGTGGCCGCTCGCGGTCA
CCGCATCTCAACCCGTCGCGTGCTGCGGGAAGCGCCGTGGCAGGTGGTGATATTTTCGCTGGGCATGTATCTGGTGGTGT
ACGGCCTGAAGAACGCCGGCCTTACCGACATGCTCACCCACCTGCTGGACACGCTTGCCGAGCAGGGCCTGTGGAGCGCG
GCCATTGGCACCGGGTTGATTTCCGCCCTGCTGTCCTCAGTCATGAACAACATGCCCAGCGTGCTGATCGGCGCATTGTC
GATCCAGGCCAGCGGTGCAGAGGGCCTGGTACGTGAGGCGATGATCTACGCCAACGTCATCGGTTGCGACCTCGGACCGA
AGATCACCCCGATCGGCAGCCTCGCCACGCTGCTTTGGCTGCATGTGCTGGCGCGTAAAGGCGTGCGCATCACCTGGGGT
TACTACTTCAAGGTCGGCCTGCTGCTCACGGTACCGGTTCTGCTGATCACCCTTTCTGCTCTGGCACTGCGCCTGAGCCT
CTGA

Protein sequence :
MLPAIAVFVFTLILVIWQPKGLGVGWSAALGAIIALATGVVSLHDIPAVWAIVWNATATFIAVIIISLLLDEAGFFEWAA
LHVARWANGSGHRLFAFCVLLGAAVSALFANDGAALILTPIVMSMLLALRFSPAATLAFVMAAGFIADTASLPLVVSNLV
NIVSADYFGLGFAEYASVMVPVNIASVAATLLVLFLYFRRDIPKQYALDALKAPSEAIHDHATFKVGGWVLLVLLAGLFA
LEPLGIPISAVAAVCAAILFAVAARGHRISTRRVLREAPWQVVIFSLGMYLVVYGLKNAGLTDMLTHLLDTLAEQGLWSA
AIGTGLISALLSSVMNNMPSVLIGALSIQASGAEGLVREAMIYANVIGCDLGPKITPIGSLATLLWLHVLARKGVRITWG
YYFKVGLLLTVPVLLITLSALALRLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
arsB2 YP_001007633.1 arsenical pump membrane protein Not tested YAPI Protein 4e-118 73
arsB YP_005754065.1 arsenical pump membrane protein Not tested Type-XI SCCmec Protein 6e-91 57
arsB YP_252017.1 arsenical pump membrane protein Not tested SCCmec Protein 8e-93 57
SH0109 YP_252024.1 arsenical pump membrane protein Not tested SCCmec Protein 7e-94 57

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
arsB-2 NP_744861.1 arsenite efflux transporter BAC0578 Protein 9e-120 74
arsB-2 NP_744861.1 arsenite efflux transporter BAC0576 Protein 2e-119 74
arsB-2 NP_744861.1 arsenite efflux transporter BAC0031 Protein 6e-120 73
arsB-2 NP_744861.1 arsenite efflux transporter BAC0577 Protein 1e-113 71
arsB-2 NP_744861.1 arsenite efflux transporter BAC0574 Protein 5e-94 57
arsB-2 NP_744861.1 arsenite efflux transporter BAC0575 Protein 4e-94 57