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Name : PP_2680 (PP_2680) Accession : NP_744824.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 3068909 - 3070429 bp Length : 1521 bp Strand : + Note : identified by match to TIGR protein family HMM TIGR01722 DNA sequence : ATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGTATCCTTCAAACCCCGTTATGGCAACTTCATCGGTGGCGAGTT CGTGCAGCCGTTGGCTGGCCAGTACTTCATCAACAGCTCGCCGGTCAATGGCCAGCCGATTGCCGAATTCCCGCGCTCCA CGGCCCAGGACGTCGAGCGCGCCCTGGACGCCGCGCATGCCGCCGCCGAAGCCTGGGGCAAGACCTCGGTGCAAGACCGT GCGCGGGTACTGCTGAAAATTGCCGACCGCATCGAACAGAACCTGGAAGTGCTGGCGGTTACCGAAAGCTGGGACAACGG CAAGGCCATACGCGAAACCTTGAATGCCGACGTGCCGCTGGCAGCGGACCACTTCCGCTATTTTGCCGGTTGCATCCGCG CCCAGGAGGGTGGCGTAGGCGAGATCAACGAAGGCACCGTGGCTTATCACATTCACGAGCCGCTGGGTGTGGTGGGGCAG ATCATCCCGTGGAACTTCCCGCTGCTGATGGCCGCCTGGAAGCTCGCCCCGGCCTTGGCCGCTGGCAACTGCGTGGTGCT CAAGCCCGCGGAGCAGACGCCGCTGTCGATTACCGTCTTTGCCGAACTGATCGCCGACCTGTTGCCGGCAGGCGTACTGA ACATCGTCCAGGGCTTTGGCCGTGAGGCCGGTGAGGCGCTGGCCACCAGCAAGCGCATTGCCAAGATCGCGTTCACCGGG TCCACCCCGGTGGGCTCGCACATCATGAAGTGCGCGGCCGAGAACATCATCCCGTCCACCGTCGAACTGGGTGGCAAGTC GCCGAACATTTTCTTCGAAGACATCATGCAGGCCGAGCCGGCGTTCATCGAGAAGGCTGCCGAAGGCCTGGTGCTGGCGT TCTTCAACCAGGGCGAGGTGTGCACCTGCCCGTCACGGGCGCTGATCCAGGAGTCGATCTACGAACCGTTCATGGCCGAG GTGATGAAGAAGATCGCCAAGATCACCCGCGGCAACCCGCTGGATACCGAAACCATGGTGGGTGCTCAGGCGTCCGAGCA ACAGTACGACAAGATCCTTTCGTACCTGGAAATTGCCCGGGAGGAGGGCGCGCAGCTGCTCACCGGCGGTGGTGCCGAGC GGCTGCAGGGTGACCTGGCCAGCGGTTACTACATTCAGCCAACCCTGCTCAAGGGCAACAACAAGATGCGCGTGTTCCAG GAAGAAATCTTCGGGCCAGTGGTGGGCGTGACCACCTTCAAGGACGAAGCCGAAGCGCTGGCGATCGCCAACGACAGTGA ATTCGGCCTGGGCGCCGGCCTGTGGACCCGCGACATCAACCGCGCTTACCGCATGGGCCGCGGGATCAAGGCCGGGCGAG TGTGGACCAACTGCTACCACCTGTACCCGGCGCATGCGGCGTTCGGGGGGTACAAGAAGTCCGGTGTTGGCCGTGAGACC CACAAGATGATGCTTGACCATTATCAGCAGACCAAGAACCTGCTGGTGAGCTACGACATCAATCCGCTGGGCTTCTTCTA A Protein sequence : MIYAQPGTPGAVVSFKPRYGNFIGGEFVQPLAGQYFINSSPVNGQPIAEFPRSTAQDVERALDAAHAAAEAWGKTSVQDR ARVLLKIADRIEQNLEVLAVTESWDNGKAIRETLNADVPLAADHFRYFAGCIRAQEGGVGEINEGTVAYHIHEPLGVVGQ IIPWNFPLLMAAWKLAPALAAGNCVVLKPAEQTPLSITVFAELIADLLPAGVLNIVQGFGREAGEALATSKRIAKIAFTG STPVGSHIMKCAAENIIPSTVELGGKSPNIFFEDIMQAEPAFIEKAAEGLVLAFFNQGEVCTCPSRALIQESIYEPFMAE VMKKIAKITRGNPLDTETMVGAQASEQQYDKILSYLEIAREEGAQLLTGGGAERLQGDLASGYYIQPTLLKGNNKMRVFQ EEIFGPVVGVTTFKDEAEALAIANDSEFGLGAGLWTRDINRAYRMGRGIKAGRVWTNCYHLYPAHAAFGGYKKSGVGRET HKMMLDHYQQTKNLLVSYDINPLGFF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 4e-149 | 66 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-156 | 65 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-156 | 65 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-156 | 65 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-155 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PP_2680 | NP_744824.1 | aldehyde dehydrogenase | VFG0082 | Protein | 2e-149 | 66 |
