Gene Information

Name : PP_2617 (PP_2617)
Accession : NP_744761.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 2993071 - 2994408 bp
Length : 1338 bp
Strand : -
Note : -

DNA sequence :
ATGAGTTCACGCAATCCCGTTCTCTGGCCCGAAGGCCTGTTCGTCAAACCACAGCATTTCCAACAGGCGGCCAGGGCCAG
CGAAGCAGCCCTGCACCAGCGCCTCGCCAGCCTCAATGCAGCCTTTTACGGCTTCAGCGAACTTCAGTTGAACGACGAAT
ACCTGAGCCTGGGCAAAGTCGCCATCACCCGGGCGCGAGGTGTGATGCCGGACGGCACGGTGTTCGACATTCCCGCCGAC
CTGCCGCCACCGCCGCCGCTGGAAATCGGCGACGACGCGTGCCAAGACAGTGAGGTGTATCTGTGCCTGCCGCTGCGTAC
CGATGGCGGCCGCGAAGTGAGCTGGCCCGACAATGCAGCCAATTTCCGCTATACCGCTCAGGTACAGGAAATCAAGGATA
CCCACTCCGCTGACGGTGACCTGGTGCAGGTAGACCTTGCGGTGCCCAACCTGCAGCTCAAACGCAAGACCGAAGACAGC
AGCGCCTACACCCGCCTGGCCCTGGCACGTATTCTGGAACGGCGCCCCGACGGCAGCCTGCAACTGGACGAAGCGTTCTA
CCCCACCAGCGTTTCGGTGCGGGCGGTGCCAGCGCTGCAGCGGTTTCTAGAGGAAATCACCCATACCTTGCGCGAGCGGG
CGCGCGGCCTTGCCACGCGGATTGGTGCCTCGGGCCAGTCCGGGATCGCCGACATTCGCGACTTCAACCTGCTGCAGGCC
ATGAACCGTTGGTGGCCATGCTTCCAGCATCTGGCCAGGCAAGCGCAAACGCACCCCGAGCAGCTGTACCTGTGCATGAG
CCAGGCCTGCGGCGAATTCGTCACCTTCACCGACCAGAACCGGCTGCCGCAGGAGTACCCCGCCTATCACCACACCGCAC
TGCGCACGTCTTTCAAACCGCTGGAAGATACCTTGCGCCGGTCTCTGAGCACCGTCTTGCGGCCACGCGCTGTTTCACTA
CCGCTGGAGAGCGAACAATTCGGCGTGATGACGACCACGCTGGAAGACCGCCGGCTGATCGACGAAGCCGACTTCATCCT
CGCCGTGCGCGCCAGCATGCCACCACAGGCGTTGCGCCAGATGTTCATCCAGAAAGCCAAGATCACCTCACTTGAGTCAC
TGAATGACCTGGTGCCGCTGCAATTGCCGGGCATCCCTTTGCTGCCATTACCCGTGGCGCCCCGCGACCTGCCCTTCCAT
GCGGGTTTCAGCTACTTCGAGCTGGACCGACGTGACCCGGCCTGGGCGTGCATGAGCAAGGCGAATGGCTTCGGCATCCA
CATTGCGGGCGACTTCCCAGGGCTTGAACTGCAGTTCTGGGCGATCAGGAGTGAGTGA

Protein sequence :
MSSRNPVLWPEGLFVKPQHFQQAARASEAALHQRLASLNAAFYGFSELQLNDEYLSLGKVAITRARGVMPDGTVFDIPAD
LPPPPPLEIGDDACQDSEVYLCLPLRTDGGREVSWPDNAANFRYTAQVQEIKDTHSADGDLVQVDLAVPNLQLKRKTEDS
SAYTRLALARILERRPDGSLQLDEAFYPTSVSVRAVPALQRFLEEITHTLRERARGLATRIGASGQSGIADIRDFNLLQA
MNRWWPCFQHLARQAQTHPEQLYLCMSQACGEFVTFTDQNRLPQEYPAYHHTALRTSFKPLEDTLRRSLSTVLRPRAVSL
PLESEQFGVMTTTLEDRRLIDEADFILAVRASMPPQALRQMFIQKAKITSLESLNDLVPLQLPGIPLLPLPVAPRDLPFH
AGFSYFELDRRDPAWACMSKANGFGIHIAGDFPGLELQFWAIRSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 4e-65 41
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 3e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_2617 NP_744761.1 hypothetical protein VFG2082 Protein 6e-100 49
PP_2617 NP_744761.1 hypothetical protein VFG2065 Protein 4e-77 45