Name : PP_2487 (PP_2487) Accession : NP_744635.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : - Position : 2833903 - 2835414 bp Length : 1512 bp Strand : - Note : identified by match to TIGR protein family HMM TIGR01722 DNA sequence : ATGAGGTACCCCATGAAAGATTCCAGCGATACCCATCCGAATCACCTTCCCGACAGCTGCTACGGCCTGTTTATCGACAA CCAGTGGGTTACGGCCGAATACGGTGAAACCCTCGACATTATCAACCCCGCCAACGGAAAAATTCTCACCAACATTCCAA ACGCCACAGCTGCCGACGTCGACCGCGCGGTGCAGGCCGCACAGCGCGCCTTCGTGACCTGGCGTACCACCTCACCAGCG GAACGCGCCAATGCGCTGTTGAAGATCGCCGACCTACTGGAAGCCGATGCCGATCGGTTCGCGGTTCTGGAAACCCTTGA TGTAGGCAAACCCATTCGTGAAAGTCGCTCCGTCGACATCCCACTGGCGATTGATCACTTCCGCTACTTCGCTGGCGTAA TCCGCAGCCAATCGGATGAGGCGGTCATGCTGGATGAGCAAACACTCAGCATCGCTCTCAGTGAACCCCTCGGCGTCGTG GGCCAAGTGATTCCGTGGAACTTCCCGCTTCTTATGGCCGCCTGGAAGATCGCTCCAGCCATCGCGGCGGGTAACACCGT AGTTATCAAACCTTCTGAGCTGACCCCGGTAACCATCCTTGAACTAGCGAAGATCTTCGCCAAGGTACTTCCGGCCGGCG TGGTCAACATCGTCACAGGCTTAGGCACCACAGTTGGACAGGCGTTACTGGATCATCCGGACCTACGCAAGCTTGCCTTC ACCGGCTCGACGCGTGTCGGCGAACTCGTCGCCAATGCGGCAGCGAAGAAAATAATTCCCGCCACCCTTGAACTGGGCGG CAAGTCGGCCAACATCGTTTTCCCCGATGCGAACTGGGACAAGGCCGTGGAAGGCGCAGTCCTCGCCATCCTGTGGAACC AAGGCCAAGTCTGCGAATCCGGCGCTCGGCTGTTCGTTCACGAATCCATCTACGAGCGATTCCTGGCTGAGCTCAAGCAT AAGTTCGAAGCTGTGCGTGTGGGTGACCCATTGAACCCGGACACCATGATGGGCGCACAGGTCAGCAAGACCCAGATGGA ACGGATCCTCGGCTACGTCGATATCGCCAAAGAGGAAGGTGCCGAGGTACTGATCGGCGGCGGTCGTCTTACAGGTGCCG ATTACGATGCCGGCTTCTTCATCCAGCCAACGATTCTGGTCGGTGTTCGCAACGATATGCGCGTCGCCTACGAGGAAATT TTCGGCCCAGTTCTGTGCGTCATTCCTTTCAAGGATGAAGCGGAGGTCATCGCCATGGCCAACGACTCCGAGTACGGCCT AGCGGGTGCAGTCTGGACCCAAGACATCAACCGGGCGTTGCGTGTGGCACGCGCGGTGGAAACCGGACGTATGTGGGTAA ATACCTACCATGAGATCCCTGCCCACGCCCCCTTTGGTGGCTATAAGAAATCTGGCCTGGGACGGGAAACTCACAAGTCA ATGCTGGAAGCCTACAGCCAGAAGAAGAACATCTACGTCAGCCTCAACGAAGCACCGCTCGGGCTCTTCTGA Protein sequence : MRYPMKDSSDTHPNHLPDSCYGLFIDNQWVTAEYGETLDIINPANGKILTNIPNATAADVDRAVQAAQRAFVTWRTTSPA ERANALLKIADLLEADADRFAVLETLDVGKPIRESRSVDIPLAIDHFRYFAGVIRSQSDEAVMLDEQTLSIALSEPLGVV GQVIPWNFPLLMAAWKIAPAIAAGNTVVIKPSELTPVTILELAKIFAKVLPAGVVNIVTGLGTTVGQALLDHPDLRKLAF TGSTRVGELVANAAAKKIIPATLELGGKSANIVFPDANWDKAVEGAVLAILWNQGQVCESGARLFVHESIYERFLAELKH KFEAVRVGDPLNPDTMMGAQVSKTQMERILGYVDIAKEEGAEVLIGGGRLTGADYDAGFFIQPTILVGVRNDMRVAYEEI FGPVLCVIPFKDEAEVIAMANDSEYGLAGAVWTQDINRALRVARAVETGRMWVNTYHEIPAHAPFGGYKKSGLGRETHKS MLEAYSQKKNIYVSLNEAPLGLF |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-105 | 52 |
aldA | ACK75580.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 4e-67 | 50 |
aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-110 | 50 |
aldA | ACK75593.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 2e-68 | 50 |
aldA | ACK75574.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 2e-68 | 50 |
aldA | ACK75590.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 2e-68 | 50 |
aldA | ACK75596.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 2e-68 | 50 |
aldA | ACK75577.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 9e-69 | 50 |
aldA | ACK75588.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 4e-68 | 50 |
aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-110 | 50 |
aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-110 | 50 |
aldA | ACK75585.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 2e-68 | 50 |
aldA | ACK75582.1 | aldehyde dehydrogenase | Not tested | VPI | Protein | 3e-68 | 50 |
aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 3e-110 | 50 |
unnamed | AAK01506.1 | putative aldehyde dehydrogenase | Not tested | PAGI-1 | Protein | 1e-73 | 42 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
PP_2487 | NP_744635.1 | aldehyde dehydrogenase | VFG0082 | Protein | 5e-106 | 52 |