Gene Information

Name : PP_2158 (PP_2158)
Accession : NP_744307.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2465631 - 2466311 bp
Length : 681 bp
Strand : -
Note : identified by match to TIGR protein family HMM TIGR01387

DNA sequence : 
ATGAAACTGCTGATCGTCGAAGACCAGGCCCGCACCGGCCAGTACCTGAGCCAAGGCCTGAGCGAGGCCGGGTTTGCCAC
CGAATTGGCCACCGATGGCGAGACCGGCCAGTTCCTCGCCCTGACCGGCGACCACGACCTGCTGATCCTCGACGTGATGC
TGCCCGGCCGCGACGGCTGGCAGATCCTTCAGGCCGTGCGCCAGGCTGGCCTGGATACGCCAGTGCTGTTCCTGACCGCC
CGCGACGCCGTCGAGGATCGCGTGCATGGCCTGGAACTGGGCGCCGACGACTACCTGGTCAAGCCGTTCGCCTTTTCCGA
GCTGCTGGCCCGGGTACGCAGCCTGCTGCGCCGTGGCACCAGCCCGAGCCAGGACACGATCCTGAGCCTGGCTGACCTGC
GCCTGGACCTGATCCGCCGCCGCGCCGAGCGTGCCGGGCTGCGCATCGACCTGACCGCCAAGGAGTTCTCACTCCTTGAG
CTGCTGCTGCGCCGCCAGGGTGAGGTGCTGCCAAAATCGCTGATCGCCTCGCAGGTGTGGGACATGAACTTCGACAGCGA
CACCAATGTGATCGAAGTGGCCATCCGCCGCCTGCGCCTGAAAATCGACGACCCGCACCCCAACAAGCTGATCCACACCG
TCCGCGGCATGGGTTACGTACTCGAAGAGCGCACCGAGTGA

Protein sequence : 
MKLLIVEDQARTGQYLSQGLSEAGFATELATDGETGQFLALTGDHDLLILDVMLPGRDGWQILQAVRQAGLDTPVLFLTA
RDAVEDRVHGLELGADDYLVKPFAFSELLARVRSLLRRGTSPSQDTILSLADLRLDLIRRRAERAGLRIDLTAKEFSLLE
LLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRLKIDDPHPNKLIHTVRGMGYVLEERTE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-49 54
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 5e-48 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0638 Protein 9e-57 70
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-62 68
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0197 Protein 6e-58 65
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0111 Protein 3e-61 63
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0308 Protein 1e-58 62
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0347 Protein 4e-54 60
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator BAC0125 Protein 2e-57 58
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator HE999704.1.gene1528. Protein 5e-26 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator VFG0596 Protein 2e-49 54
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator VFG1390 Protein 2e-33 44
PP_2158 NP_744307.1 two component heavy metal response transcriptional regulator VFG1389 Protein 8e-30 43