Gene Information

Name : PP_1872 (PP_1872)
Accession : NP_744027.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Unknown
Product : aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0436
EC number : 2.6.1.2
Position : 2095263 - 2096474 bp
Length : 1212 bp
Strand : -
Note : broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor

DNA sequence :
ATGCAGTTCAGCAAATCGAACAAGCTCGCCAATGTCTGCTACGACATTCGCGGCCCAGTGCTCAAGCACGCCAAACGCCT
GGAGGAGGAAGGCCACCGCATCCTCAAGCTGAACATCGGCAACCCGGCGCCGTTTGGCTTCGAGGCGCCTGATGAAATCC
TTCAGGATGTGATCCGCAACCTGCCCACCGCACAGGGCTACAGCGACTCCAAAGGCCTGTTCAGTGCCCGCAAGGCGGTG
ATGCAGTACTGCCAGCAGAAAGATATCGAAGGCGTCACCATCGAGGACATCTACCTGGGTAATGGTGTGTCCGAGCTGAT
CGTCATGTCGATGCAGGCGCTGCTCAACAACGGCGACGAAGTGCTGATCCCGGCCCCCGACTACCCGCTGTGGACTGCCG
CCGTGAGCCTGGCCGGCGGCAAGCCGGTGCACTACCTGTGCGACGAGCAGGCCGACTGGTTCCCTGACCTTGAGGACATC
AAGGCCAAGATCACCCCGAACACCAAGGCGCTGGTGATCATCAACCCGAACAACCCGACCGGCGCCGTCTACTCCAAAGA
ACTGCTGCTGGGCATGCTGGAGCTGGCCCGCCAGCACAACCTGGTGGTGTTCTCCGACGAGATCTACGACAAGATCCTGT
ACGACGAAGCCGTGCACATCAGCACCGCCTCGCTGGCTCCGGACCTGCTGTGCCTGACCTTCAACGGCTTGTCCAAGTCG
TACCGGGTGGCGGGCTTCCGCTCTGGCTGGCTGATCATTTCCGGGCCCAAGCACCACGCACACAGCTACATCGAAGGCAT
CGACATGCTGGCCAACATGCGCCTGTGCGCCAACGTGCCGGCCCAGCATGCCATCCAGACCGCGCTGGGCGGCTACCAGA
GCATCAACGACCTGGTGCTGCCGCCGGGCCGCCTGCTGGAGCAGCGCAACCGCACCTACGAACTGCTCAACGACATCCCT
GGCGTCAGCTGCGTGAAACCGATGGGCGCGCTGTATGCGTTCCCGCGGATCGACCCGAAGGTTTGCCCGATCCTCAACGA
CGAGAAGTTCGCCCTTGACCTGCTGCTGTCGGAGAAGCTGCTGATCGTACAAGGGACGGCGTTCAACTGGCCGTGGCCGG
ACCACTTCCGCGTGGTGACCTTGCCGCGGGTGGATGACCTGGAAGCGGCAATTGGCCGGATCGGCAATTTCCTGAAGGGT
TATTCGCAGTAG

Protein sequence :
MQFSKSNKLANVCYDIRGPVLKHAKRLEEEGHRILKLNIGNPAPFGFEAPDEILQDVIRNLPTAQGYSDSKGLFSARKAV
MQYCQQKDIEGVTIEDIYLGNGVSELIVMSMQALLNNGDEVLIPAPDYPLWTAAVSLAGGKPVHYLCDEQADWFPDLEDI
KAKITPNTKALVIINPNNPTGAVYSKELLLGMLELARQHNLVVFSDEIYDKILYDEAVHISTASLAPDLLCLTFNGLSKS
YRVAGFRSGWLIISGPKHHAHSYIEGIDMLANMRLCANVPAQHAIQTALGGYQSINDLVLPPGRLLEQRNRTYELLNDIP
GVSCVKPMGALYAFPRIDPKVCPILNDEKFALDLLLSEKLLIVQGTAFNWPWPDHFRVVTLPRVDDLEAAIGRIGNFLKG
YSQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aspC YP_003784329.1 aspartate aminotransferase Not tested PiCp 7 Protein 3e-128 65
aspC YP_005686363.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-128 65
aspC YP_005682179.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-128 65
aspC YP_005684271.1 Aminotransferase AlaT Not tested PiCp 7 Protein 3e-128 65