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Name : murD (PP_1335) Accession : NP_743494.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 1520740 - 1522092 bp Length : 1353 bp Strand : + Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGAGCGTGTCTTTGATCGCTTCCGACCAATTCCGCATCGTTGTCGGCCTCGGCAAGAGCGGCATGTCCCTGGTTCGCTT CCTGGCGAGCCGGGGCATTGCCTTTGCGGTCGCCGATACCCGCGAGCAGCCGCCGGAACTGGAAACCCTGCGCCGTGATT ACCCGCAGGTGGAAGTGCGCTGTGGTGAACTGGACGTGGACTTCCTGTGCCGCGCCAACGAGCTGTACGTGAGCCCCGGC CTGGCCTTGGCCACGCCGGCCTTGCAGCAGGCTGCCGCGCGTGGCGTGAAGCTGTCTGGCGACATAGAGCTGTTTGCTCG CCATGCCAAGGCGCCGATCGTTGCCATCAGTGGTTCCAACGCCAAGAGCACCGTCACGACGCTGGTCGGTGAAATGGCCG CCAAGGCCGGCAAACGCGTGGCCGTGGGCGGTAACCTCGGTACCCCGGCACTCGACCTGCTGGCCGATGACATCGAGCTG TACGTGCTGGAGCTTTCCAGCTTCCAGCTGGAAACCACTGACCAGCTCAACGCCGAAGTGGCGACCGTTCTGAACATCAG CGAAGACCACATGGACCGCTATAGCGGCCTTCCGGCCTACCACCTGGCCAAACACCGGATTTTCCGCGGTGCCCGCCAGG TGGTGGTCAACCGCCAGGACGCCCTGAGCCGGCCGCTGCCGGTGGAAGGCCGTCCATGCTGGACCTTCGGCCTCAACCCG CCCGACTTCAAAGCGTTTGGCCTGCGTGAAGTGGACGGTGAGAAATACCTGGCGTTCGAGTTCCAGACGCTGATGCCGGC GCGTGAACTGAAGGTTCGCGGTGCTCACAACCAGAGTAACGCCCTGGCGGCGCTGGCCCTGGGGCATGCTGCCGGCCTGC CGTTCGAGCCCATGCTGGAGGCTCTGCGCGAATTCGGTGGCCTGGCCCACCGGTGCCAGTGGGTACGCGAGCGTAATGGC GTGAACTGGTACGACGATTCCAAAGCCACCAACGTCGGTGCAGCCCTGGCCGCCATCGAAGGCCTGGGCGCTGATATCGA AGGCAAGTTGGTGCTGATCGCCGGTGGTGACGGCAAAGGTGCTGAATTCACTGCGCTGCGCGAGCCGGTCAAGCGTTTCT GCCGCGCCGTGGTATTGCTTGGCCGTGATGCCGAGCGCCTGGCCGAGGCCTTGGGCGATGCCGTGCCACTGGTTCGGGTC AAGACGCTTGACGATGCCGTACAGCAGTGTGCCGAACTGGCCCAGGCCGGCGATGCCGTGCTGCTGTCGCCAGCATGCGC CAGCCTCGACATGTTCAAGAACTTCGAGGAACGGGGACGCCTGTTCGCCCAGGCAGCGGGAGGTCTTGCATGA Protein sequence : MSVSLIASDQFRIVVGLGKSGMSLVRFLASRGIAFAVADTREQPPELETLRRDYPQVEVRCGELDVDFLCRANELYVSPG LALATPALQQAAARGVKLSGDIELFARHAKAPIVAISGSNAKSTVTTLVGEMAAKAGKRVAVGGNLGTPALDLLADDIEL YVLELSSFQLETTDQLNAEVATVLNISEDHMDRYSGLPAYHLAKHRIFRGARQVVVNRQDALSRPLPVEGRPCWTFGLNP PDFKAFGLREVDGEKYLAFEFQTLMPARELKVRGAHNQSNALAALALGHAAGLPFEPMLEALREFGGLAHRCQWVRERNG VNWYDDSKATNVGAALAAIEGLGADIEGKLVLIAGGDGKGAEFTALREPVKRFCRAVVLLGRDAERLAEALGDAVPLVRV KTLDDAVQQCAELAQAGDAVLLSPACASLDMFKNFEERGRLFAQAAGGLA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 5e-84 | 53 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 5e-84 | 53 |
