Gene Information

Name : xcpT-1 (PP_1049)
Accession : NP_743210.1
Strain : Pseudomonas putida KT2440
Genome accession: NC_002947
Putative virulence/resistance : Virulence
Product : general secretion pathway protein G
Function : -
COG functional category : N : Cell motility
COG ID : COG2165
EC number : -
Position : 1200343 - 1200798 bp
Length : 456 bp
Strand : +
Note : similar to GP:3297910, and GP:3297910; identified by sequence similarity

DNA sequence : 
GTGACGACGAGGAGTATTGCCATGCAGCATCGACGTAACCGCCAACGCGGTTTCACCCTCATGGAAATCATGGTGGTGAT
CTTTATCATCGGCCTGCTGATTGCCGTGGTAGCGCCCAGCGTGCTGGGCAACCAGGACAAGGCCATGAAGCAGAAGGTGA
TGGCCGACCTGGCCACCCTGGAGCAGGCGCTGGACATGTATCGCCTGGACAACCTGCGCTTCCCCAGCAACGAACAGGGC
CTGGCCGCGCTGGTGAAAAAGCCGGCTCAGGAGCCGCTGCCTCGGGCCTGGCGCAGTGATGGCTACGTGCGTCGCCTGCC
GGAAGACCCGTGGGGCACCCCTTATCAGTACCGCATGCCCGGTGAACATGGCCGGGTCGATGTGTACTCGCTGGGCGCCG
ATGGCCTGCCGGGCGGCGAAGGCCAGGATGCCGACCTGGGTAACTGGGCGCTGTAA

Protein sequence : 
MTTRSIAMQHRRNRQRGFTLMEIMVVIFIIGLLIAVVAPSVLGNQDKAMKQKVMADLATLEQALDMYRLDNLRFPSNEQG
LAALVKKPAQEPLPRAWRSDGYVRRLPEDPWGTPYQYRMPGEHGRVDVYSLGADGLPGGEGQDADLGNWAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspG YP_854404.1 type II secretion protein GspG Not tested PAI I APEC-O1 Protein 2e-37 54
gspG CAE85231.1 GspG, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-37 54

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
xcpT-1 NP_743210.1 general secretion pathway protein G VFG2050 Protein 4e-38 54
xcpT-1 NP_743210.1 general secretion pathway protein G VFG0180 Protein 2e-36 54
xcpT-1 NP_743210.1 general secretion pathway protein G VFG1871 Protein 9e-34 49