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Name : xcpS-1 (PP_1048) Accession : NP_743209.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1199144 - 1200346 bp Length : 1203 bp Strand : + Note : similar to GB:M61856, GB:X56452, GB:L16869, GB:L16870, GB:L16871, GB:L16872, GB:L16873, GB:L16874, GB:L16875, GB:L16876, SP:P33260, PID:181300, PID:306327, PID:433672, GB:M61856, GB:X56452, GB:L16869, GB:L16870, GB:L16871, GB:L16872, GB:L16873, GB:L16874, DNA sequence : ATGCCGACCTATCGCTACCAGGCCGTTGACCTCGCCGGCAAATCGCACAAGGCCAGCCTGCAGGCTGACAGTGAACGCCA CGCCCGCCAGCTGTTGCGCGAGCAGGGCCTGTTCGCCCGCCAGTTGCAGCGTCATGACGCCGGCAGCCGACAACCCCGAC GCCAGCGCCTGAGCCGCGCCCAGCTGTGTGAGCTGACCCGTCAGCTGGCCACCTTGACCGGGGCCGGCATTCCCTTGGTC GATGCCCTTGCCACCCTTGAACGGCAACTGCGTCAGCCTGCCCTGCACAGTGTGCTGGTGGCCTTGCGCGGCTCACTCGC CGAAGGCCTGGGCCTGGCCCGCAGCCTGGCCCGGCAGGGCGCACCGTTCACTGGCTTGTACTGCGCGCTGGTCGAGGCCG GCGAACGTTCCGGGCACCTGGCCCAGGTGCTGACCCGCTTGGCCGACCACCTGGAGCAGGTGCAACGCCAGCAACACAAG GCCCGCACAGCGCTGATCTACCCCGCTGTGCTGATGGGTGTGTCGCTGGCCGTGGTGATTGGCCTGATGACGTTCGTCGT GCCCAAACTCACCGAGCAATTCGCCCATGCCGGGCAAAGCCTGCCGCTGATCACCTCGTTGCTGATCGGCCTGAGCCAGG GGCTGGTGCACGCCGGGCCCTGGTTGTTAGGGGTGGCGCTGTTGCTCGGGGGGCTGGCTGGCTGGTTGTTGCGCAAACCG CACTGGTGCCTGCGTCGCGACCAGCTGCTGCTGCGCCTGCCGCGTATTGGCAACCTGCTGCAGGTGCTGGAAAGCGCGCG TCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCG GCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGAT GCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGA GCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCTGATGATCC TGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTG TGA Protein sequence : MPTYRYQAVDLAGKSHKASLQADSERHARQLLREQGLFARQLQRHDAGSRQPRRQRLSRAQLCELTRQLATLTGAGIPLV DALATLERQLRQPALHSVLVALRGSLAEGLGLARSLARQGAPFTGLYCALVEAGERSGHLAQVLTRLADHLEQVQRQQHK ARTALIYPAVLMGVSLAVVIGLMTFVVPKLTEQFAHAGQSLPLITSLLIGLSQGLVHAGPWLLGVALLLGGLAGWLLRKP HWCLRRDQLLLRLPRIGNLLQVLESARLARSLAILCGSGVALLEALQVATETIGNRRIRLAMEQVRQHVQGGTSLHRALD ASQQFPPLLVNMVGSGEASGTLADMLERVADDQERGFARQVDTAMALFEPLMILVMGAVVLFIVLAVLLPIMQLNQGLQL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 1e-49 | 42 |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-48 | 42 |
