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Name : PP_0104 (PP_0104) Accession : NP_742274.1 Strain : Pseudomonas putida KT2440 Genome accession: NC_002947 Putative virulence/resistance : Unknown Product : cytochrome c oxidase subunit I Function : - COG functional category : C : Energy production and conversion COG ID : COG0843 EC number : - Position : 109980 - 111569 bp Length : 1590 bp Strand : + Note : identified by match to TIGR protein family HMM TIGR00780 DNA sequence : ATGAGTGCAGTGATCGACGACCACGCCCACGGCCACGACCATGCGCACGGCCCGGCCAAGGGCCTGATGCGCTGGGTGCT GACCACCAACCATAAAGACATCGGCACGATGTACCTGTGGTTCAGTTTCATCATGTTCCTGCTCGGTGGCTCGTTTGCCA TGGTGATCCGCGCTGAGCTGTTCCAGCCGGGTTTGCAGATCGTGGAGCCGGCGTTCTTCAACCAGATGACCACCATGCAT GGCCTGATCATGGTGTTTGGCGCGGTGATGCCGGCCTTCGTCGGCCTGGCCAACTGGATGATTCCGCTGATGATCGGCGC GCCCGACATGGCACTGCCACGGATGAACAACTTCAGCTTCTGGCTGCTGCCGGCGGCCTTCCTGCTGCTGGTATCGACGC TGTTCAGCCCGGGCGGAGGGCCAAACTTTGGCTGGACCTTCTACGCTCCGCTTTCCACCACCTATGCGCCAGCCAGCGTC ACCTTCTTCATCTTCGCCATCCACCTGATGGGTATCAGCTCGATCATGGGGGCGATCAACGTGATTGCCACCATCCTCAA CCTGCGTGCCCCCGGCATGACGCTGATGAAAATGCCGCTGTTCGTCTGGACCTGGCTGATCACCGCGTTCCTGCTGATTG CGGTGATGCCAGTACTGGCCGGCGTGGTAACCATGATGCTGATGGATATCCACTTCGGTACCAGCTTTTTCAGTGCCGCA GGTGGCGGTGACCCGGTGCTGTTCCAGCATGTGTTCTGGTTCTTCGGCCACCCTGAGGTTTACATCATGATCCTGCCCGC CTTCGGTGCGGTCAGCTCGATCATCCCGGCGTTCTCGCGCAAGCCGCTGTTCGGTTATACCTCGATGGTGTATGCCACCG GCGCCATTGCCTTCCTGTCATTCATCGTCTGGGCCCACCATATGTTTGTGGTCGGTATCCCGGTGGTCGGCGAGTTGTTC TTCATGTACGCCACCATGCTGATTGCCGTGCCCACCGGGGTGAAGGTATTCAACTGGGTCAGCACCATGTGGGAAGGTTC GCTCACCTTCGAAACGCCGATGCTGTTCGCCATCGCCTTTGTCATCCTGTTCACCATCGGGGGTTTCTCCGGGTTGATGC TGGCGATCGCCCCGGCAGACTTCCAGTACCACGACACTTACTTCGTGGTGGCGCATTTCCACTACGTACTGGTGCCTGGT GCAATTTTCGGCATCTTTGCCTCGGCCTACTACTGGCTGCCGAAATGGACCGGCCACATGTACGACGAAACCCTCGGCAA ACTGCACTTCTGGCTGTCGTTCGTCGGCATGAACATGGCCTTCTTCCCCATGCACTTCGTAGGCTTGGCCGGCATGCCAC GGCGCATCCCCGACTACAACCTGCAGTTCGCCGATTTCAACATGGTGTCGTCGATCGGCGCGTTCATGTTCGGCGCCACG CAGATCTTCTTCCTGTTCATTGTCATCAAGTGCATCCGCGGTGGCGCGCCGGCACCGGCCAAACCCTGGGATGGCGCCGA GGGCCTTGAGTGGTCGATACCCTCGCCTGCGCCCTACCACACCTTCCAGACACCCCCGGAAGTGAAATAG Protein sequence : MSAVIDDHAHGHDHAHGPAKGLMRWVLTTNHKDIGTMYLWFSFIMFLLGGSFAMVIRAELFQPGLQIVEPAFFNQMTTMH GLIMVFGAVMPAFVGLANWMIPLMIGAPDMALPRMNNFSFWLLPAAFLLLVSTLFSPGGGPNFGWTFYAPLSTTYAPASV TFFIFAIHLMGISSIMGAINVIATILNLRAPGMTLMKMPLFVWTWLITAFLLIAVMPVLAGVVTMMLMDIHFGTSFFSAA GGGDPVLFQHVFWFFGHPEVYIMILPAFGAVSSIIPAFSRKPLFGYTSMVYATGAIAFLSFIVWAHHMFVVGIPVVGELF FMYATMLIAVPTGVKVFNWVSTMWEGSLTFETPMLFAIAFVILFTIGGFSGLMLAIAPADFQYHDTYFVVAHFHYVLVPG AIFGIFASAYYWLPKWTGHMYDETLGKLHFWLSFVGMNMAFFPMHFVGLAGMPRRIPDYNLQFADFNMVSSIGAFMFGAT QIFFLFIVIKCIRGGAPAPAKPWDGAEGLEWSIPSPAPYHTFQTPPEVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cur_1478 | YP_001800872.1 | cytochrome c oxidase subunit I | Not tested | Not named | Protein | 8e-99 | 48 |
